Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-461P-201ENST00000364195 107 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 SET-203ENST00000372688 801 ntTSL 2 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 Y_RNA.474-201ENST00000384341 102 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 MIR521-1-201ENST00000384902 87 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 RNU2-23P-201ENST00000410545 195 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 RN7SKP123-201ENST00000410732 291 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AC097463.2-201ENST00000421074 142 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 RPL23AP70-201ENST00000483361 460 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-56P-201ENST00000516986 93 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AC078795.3-201ENST00000602913 472 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 MIR7157-201ENST00000635801 60 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-692P-201ENST00000384496 107 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 CYCSP48-201ENST00000417124 323 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC022018.1-201ENST00000430685 241 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 MICF-203ENST00000432679 129 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 UBBP3-201ENST00000445497 241 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC008571.1-201ENST00000467232 300 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 RPS26P21-201ENST00000475397 348 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 RAB11AP2-201ENST00000545905 639 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC103810.1-201ENST00000579873 453 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC090616.3-201ENST00000582184 217 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC073410.2-201ENST00000603240 332 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 MIR7106-201ENST00000612419 65 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 AC080128.1-201ENST00000474389 1917 ntBASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PRPF38AQ8NAV1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 OR56A5-201ENST00000340110 738 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-797P-201ENST00000363101 109 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-596P-201ENST00000365395 98 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-1297P-201ENST00000384415 104 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-306P-201ENST00000384617 107 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 EIF1AXP1-201ENST00000419267 435 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AL133396.1-201ENST00000432048 687 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AC025750.2-201ENST00000442609 450 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-277P-201ENST00000516272 106 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 Y_RNA.708-201ENST00000516950 96 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 MIR3199-1-201ENST00000582434 88 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 MIR5690-201ENST00000583739 73 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AL117336.2-201ENST00000602435 335 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 AC016727.1-205ENST00000605437 569 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 PISRT1.1-201ENST00000616930 107 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 MIR6852-201ENST00000621699 66 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 Z75746.1-201ENST00000440243 2080 ntBASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PRPF38AQ8NAV1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 U8.8-201ENST00000365399 135 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 MIR627-201ENST00000384979 97 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 MTND3P9-201ENST00000429526 346 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AC244505.4-201ENST00000434905 287 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AC236972.2-201ENST00000434979 310 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 SSXP5-201ENST00000443473 287 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 SNORD5.1-201ENST00000458800 75 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 MTND4P17-201ENST00000470444 350 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 PTP4A1P4-201ENST00000512479 322 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-559P-201ENST00000516151 98 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AL355375.2-201ENST00000574825 175 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AC018462.2-201ENST00000605375 395 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AC112487.2-201ENST00000637950 304 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 MTND5P19-201ENST00000424872 1794 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 AP000560.1-201ENST00000624150 1937 ntBASIC3.5□□□□□ -1.85
PRPF38AQ8NAV1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AC009541.1-201ENST00000438279 2662 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms