Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 CUL1P1-201ENST00000509510 2425 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AL161912.2-201ENST00000565707 3007 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 RNU6-270P-201ENST00000364131 105 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 MIR10B-201ENST00000385011 110 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 MIR1298-201ENST00000408783 112 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 RN7SKP61-201ENST00000410642 295 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 RNU6-628P-201ENST00000410675 107 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AL139156.1-201ENST00000412785 841 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 WARS2P1-201ENST00000429678 537 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AL138752.1-201ENST00000452964 351 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 RPS4XP13-201ENST00000483219 789 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AC006445.2-201ENST00000510061 472 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 RNA5SP49-201ENST00000516450 115 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 CYCSP29-201ENST00000533731 318 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 TRAV8-5-201ENST00000537369 341 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 UBL5P4-201ENST00000562584 236 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 SNORD113-5-201ENST00000607261 78 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AC004792.1-201ENST00000614523 137 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 FTX_2.1-201ENST00000618816 94 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 AC244205.2-202ENST00000635781 342 ntBASIC3.45□□□□□ -1.86
DTX3Q8N9I9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DTX3Q8N9I9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC073073.2-201ENST00000609827 2578 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RNU6-1159P-201ENST00000362933 107 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RNU6-137P-201ENST00000363680 108 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 Y_RNA.270-201ENST00000364693 104 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RNU6-159P-201ENST00000391080 106 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RNU2-37P-201ENST00000410695 177 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC004975.1-201ENST00000428733 208 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RPL29P14-201ENST00000495837 428 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 SEPT14P8-201ENST00000508026 178 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RNU6-58P-201ENST00000517143 103 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 CKS1BP7-201ENST00000522230 235 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AL391261.3-201ENST00000557194 520 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC021739.1-201ENST00000559631 174 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC025627.2-201ENST00000576220 160 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC037487.3-201ENST00000606668 112 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 AC110491.1-201ENST00000562191 2010 ntBASIC3.44□□□□□ -1.86
DTX3Q8N9I9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
DTX3Q8N9I9 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 MAPK10-362ENST00000641864 4484 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 AC092268.1-201ENST00000342691 405 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 SNORA60-201ENST00000362396 134 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 Y_RNA.150-201ENST00000363562 102 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU1-64P-201ENST00000365443 163 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU6-281P-201ENST00000384212 103 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 SNORA36A-201ENST00000384221 132 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU6-21P-201ENST00000384710 107 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 MIR487A-201ENST00000385009 80 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 EI24P2-201ENST00000397776 1076 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 MIR548M-201ENST00000408260 86 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU5A-5P-201ENST00000411054 116 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU6-1001P-201ENST00000411265 100 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 BPY2DP-201ENST00000422208 265 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 AC078809.1-201ENST00000427601 140 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 COX6B1P7-201ENST00000430845 235 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 TRBV12-2-201ENST00000489763 344 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 RNU1-61P-201ENST00000516107 151 ntBASIC3.43□□□□□ -1.86
DTX3Q8N9I9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.43□□□□□ -1.86
DTX3Q8N9I9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms