Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC062016.1-201ENST00000355719 319 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 SNORD62.1-201ENST00000362541 86 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.339-201ENST00000365325 102 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 RNU6-933P-201ENST00000384424 107 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 MIR181B1-201ENST00000385240 110 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 MT-TD-201ENST00000387419 68 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 MIR548F5-201ENST00000408421 86 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 RNA5SP184-201ENST00000411071 108 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 RNU7-187P-201ENST00000458985 68 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AP001025.1-201ENST00000486139 332 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC114801.2-201ENST00000503825 781 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 FGF7P4-201ENST00000509595 295 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 SNORA31.18-201ENST00000517043 134 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 CKS1BP7-201ENST00000522230 235 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC097372.5-201ENST00000623665 376 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 AC090617.7-201ENST00000623952 126 ntBASIC2.59□□□□□ -1.99
BEST3Q8N1M1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.59□□□□□ -2
BEST3Q8N1M1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
BEST3Q8N1M1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
BEST3Q8N1M1 RNU6-622P-201ENST00000384272 103 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 RN7SKP158-201ENST00000410453 326 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 RNU2-41P-201ENST00000410991 178 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 RNU6-325P-201ENST00000411132 105 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 RPL37P10-201ENST00000412884 288 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AL451074.5-201ENST00000415894 435 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 NUP35P1-201ENST00000422734 947 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AC007969.2-201ENST00000441891 191 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 SNRPEP8-201ENST00000442866 260 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.58□□□□□ -2
BEST3Q8N1M1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 SNORD109B-201ENST00000458961 67 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 SNORD109A-201ENST00000459128 67 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AP001324.2-201ENST00000461163 319 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AC018437.1-201ENST00000492214 406 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.58□□□□□ -2
BEST3Q8N1M1 SMURF2P1-201ENST00000514992 481 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 RN7SKP24-201ENST00000515888 284 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.58□□□□□ -2
BEST3Q8N1M1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.58□□□□□ -2
BEST3Q8N1M1 GLYCAM1-201ENST00000546596 285 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.58□□□□□ -2
BEST3Q8N1M1 AC090897.2-201ENST00000581715 130 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.58□□□□□ -2
BEST3Q8N1M1 AL627309.6-201ENST00000606857 840 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 AL109809.4-201ENST00000603520 2185 ntBASIC2.58□□□□□ -2
BEST3Q8N1M1 MTND5P30-201ENST00000452896 1731 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
BEST3Q8N1M1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
BEST3Q8N1M1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 RNU6-593P-201ENST00000364716 112 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 SNORD21-201ENST00000383953 95 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 MIR512-1-201ENST00000384913 84 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.57□□□□□ -2
BEST3Q8N1M1 ATG3P1-201ENST00000419507 911 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 SAR1AP4-201ENST00000429225 591 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 RPS3AP52-201ENST00000435639 297 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 FABP5P14-201ENST00000437273 393 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 RPL23AP58-201ENST00000440453 469 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC243964.1-201ENST00000441814 261 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 MTND3P22-201ENST00000510932 243 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 RNU6-612P-201ENST00000516909 102 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 RNU1-54P-201ENST00000517181 120 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.57□□□□□ -2
BEST3Q8N1M1 AC105137.2-201ENST00000569073 466 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 CPDP1-201ENST00000579660 283 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 MIR3162-201ENST00000581818 82 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 FGF7P1-201ENST00000582820 288 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 RPS15AP11-201ENST00000594193 385 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC010620.2-201ENST00000600135 313 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC124303.1-201ENST00000605703 360 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.57□□□□□ -2
BEST3Q8N1M1 AC019193.3-201ENST00000609144 554 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AL133215.3-201ENST00000609801 448 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AL132765.2-201ENST00000610812 351 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AL359198.2-201ENST00000611836 194 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AL161423.1-201ENST00000613700 262 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC009233.1-201ENST00000616477 371 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AL136360.1-201ENST00000503377 1900 ntBASIC2.57□□□□□ -2
BEST3Q8N1M1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.57□□□□□ -2
BEST3Q8N1M1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BEST3Q8N1M1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
BEST3Q8N1M1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.57□□□□□ -2
BEST3Q8N1M1 AL359854.1-201ENST00000614203 1594 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms