Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 MLLT10P2-201ENST00000506434 249 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 RNU6-453P-201ENST00000516819 85 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AC090281.1-201ENST00000523019 276 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AP004242.1-201ENST00000533701 349 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 SNORD84-203ENST00000584275 78 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AC020895.1-201ENST00000595362 272 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AL034408.1-202ENST00000636088 415 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 SPRR2C-201ENST00000290702 219 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 DEFB108F-201ENST00000344638 222 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 SNORD115-8-201ENST00000363856 82 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 RNU6-755P-201ENST00000364400 103 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 SNORD115-38-201ENST00000365037 82 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 MIR549A-201ENST00000385268 96 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 RNU6-1248P-201ENST00000391096 64 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 RPS12P23-201ENST00000419579 400 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 NDUFB4P7-201ENST00000423198 363 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AL138785.1-201ENST00000425821 331 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 RPL21P66-201ENST00000426566 466 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 GPM6BP3-201ENST00000442797 145 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AC010469.1-201ENST00000463864 576 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 RPL29P14-201ENST00000495837 428 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 RNU6-1198P-201ENST00000516904 67 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AC115990.1-201ENST00000526957 301 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AC109810.1-201ENST00000534066 224 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 MTND5P34-201ENST00000568888 325 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 LARP7P3-201ENST00000579888 337 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 MIR5684-201ENST00000585074 65 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 AL020997.2-201ENST00000602607 184 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 MIR8059-201ENST00000620427 81 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 Z82217.1-201ENST00000625157 8149 ntBASIC3.72□□□□□ -1.81
ATG4DQ86TL0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4DQ86TL0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RNU6-103P-201ENST00000363686 107 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RNY1P11-201ENST00000363759 113 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RNU6-801P-201ENST00000364087 105 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 SNORA3C-201ENST00000408792 125 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RNU2-54P-201ENST00000410299 190 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 ELOCP21-201ENST00000412558 336 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RPL23AP95-201ENST00000426806 265 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AC112220.1-201ENST00000434628 355 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RPL30P12-201ENST00000474666 353 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RN7SL604P-201ENST00000492589 296 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 SCARNA8-201ENST00000515924 131 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RNU6-844P-201ENST00000517175 102 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 CYCSP39-201ENST00000565821 309 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 VN1R85P-201ENST00000601587 426 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 MIR6867-201ENST00000610636 67 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AL773545.4-201ENST00000637262 310 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 AL513478.4-201ENST00000641636 310 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 ZNF962P-201ENST00000443465 3140 ntBASIC3.71□□□□□ -1.82
ATG4DQ86TL0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ATG4DQ86TL0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AF127577.6-201ENST00000623352 2191 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms