Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-1332P-201ENST00000516666 104 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 RNU7-30P-201ENST00000516835 62 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 AC026464.5-201ENST00000562497 722 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 MIR3670-2-201ENST00000582974 65 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 MIR3670-1-201ENST00000584160 65 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 MIR3670-3-201ENST00000584855 65 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 BNIP3P16-201ENST00000589779 534 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 AC064836.2-201ENST00000609491 462 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 MIR3670-4-201ENST00000612260 65 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 AC025253.1-201ENST00000613623 543 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 AL133216.2-202ENST00000634512 349 ntBASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.99□□□□□ -1.93
SYNE3Q6ZMZ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 Y_RNA.184-201ENST00000363884 108 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 RNU2-41P-201ENST00000410991 178 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 NCOR1P3-201ENST00000420479 303 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 SNAP23P1-201ENST00000433229 246 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AC004383.1-201ENST00000438135 289 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 FGF7P4-201ENST00000509595 295 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AC114781.4-201ENST00000513707 639 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 RNU6-566P-201ENST00000516790 107 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 RN7SKP40-201ENST00000517211 242 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 SNORA31.23-201ENST00000517219 133 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 RNA5SP454-201ENST00000517231 127 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 CKS1BP7-201ENST00000522230 235 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AP005639.2-201ENST00000527592 928 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AC004486.1-201ENST00000546846 233 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AL121917.1-203ENST00000605534 577 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 uc_338.14-201ENST00000613162 166 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AC005858.4-201ENST00000623191 700 ntBASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.98□□□□□ -1.93
SYNE3Q6ZMZ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 RNU6-562P-201ENST00000362731 107 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 RNU6-336P-201ENST00000364891 107 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 RNU6-95P-201ENST00000384697 107 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 MIR27B-201ENST00000385129 97 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AL356432.1-201ENST00000405809 419 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 MIR548K-201ENST00000408406 116 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC074117.2-201ENST00000417130 397 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC007969.2-201ENST00000441891 191 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AL109933.2-201ENST00000452651 260 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 SNORA31.15-201ENST00000516771 132 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC026371.1-201ENST00000551867 419 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC091135.1-201ENST00000585943 307 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC008739.2-201ENST00000597006 317 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 UCA1.1-201ENST00000620952 75 ntBASIC2.97□□□□□ -1.93
SYNE3Q6ZMZ3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-827P-201ENST00000365553 106 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 SNORD116-20-201ENST00000384529 92 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AL513475.1-201ENST00000406602 315 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 HMGB1P18-201ENST00000438801 619 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC108938.1-201ENST00000451204 136 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AP000705.1-201ENST00000454567 350 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 MTND1P11-201ENST00000456661 876 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC133134.1-201ENST00000466800 359 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 RPL31P41-201ENST00000477967 372 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC103851.1-201ENST00000506833 274 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-377P-201ENST00000515965 102 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AP000889.1-201ENST00000530968 660 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 TRAV32-201ENST00000553993 340 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 CPDP1-201ENST00000579660 283 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AL355877.2-201ENST00000603670 358 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC009994.1-201ENST00000606889 253 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC104260.1-201ENST00000616660 539 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 AC010297.1-201ENST00000623948 149 ntBASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SYNE3Q6ZMZ3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-428P-201ENST00000362942 107 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-867P-201ENST00000364956 107 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms