Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 MIR4789-201ENST00000577469 82 ntBASIC0.44□□□□□ -2.34
CCDC171Q6TFL3 VN1R82P-201ENST00000601481 356 ntBASIC0.44□□□□□ -2.34
CCDC171Q6TFL3 AC105129.3-201ENST00000605455 485 ntBASIC0.44□□□□□ -2.34
CCDC171Q6TFL3 AL365434.2-201ENST00000607979 234 ntBASIC0.44□□□□□ -2.34
CCDC171Q6TFL3 AC068787.1-201ENST00000623908 691 ntBASIC0.44□□□□□ -2.34
CCDC171Q6TFL3 MTND4P21-201ENST00000453886 1357 ntBASIC0.44□□□□□ -2.34
CCDC171Q6TFL3 snoU2_19.1-201ENST00000362361 80 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RNU6-1210P-201ENST00000363775 107 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 MIR520A-201ENST00000384862 85 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 MIR29B2-201ENST00000385055 81 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RNU2-7P-201ENST00000410794 178 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RPS26P5-201ENST00000418544 335 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RAC1P6-201ENST00000423911 575 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC005534.2-201ENST00000431047 433 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC012308.1-201ENST00000451232 178 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RPS27AP8-201ENST00000452665 445 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RNU6-333P-201ENST00000459117 107 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 MED28P2-201ENST00000475771 317 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RPF2P2-201ENST00000504693 896 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC097473.1-201ENST00000508142 408 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC074344.1-201ENST00000512823 224 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RNU6-143P-201ENST00000516942 93 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 SNORA70.22-201ENST00000517160 124 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC090142.3-201ENST00000519012 385 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AP003072.2-201ENST00000527756 676 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 OR6C7P-201ENST00000547875 934 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC025678.1-201ENST00000567861 338 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC078795.2-201ENST00000602835 1252 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 RMST_4.1-201ENST00000616886 107 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC068647.2-201ENST00000637380 353 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 AC107982.1-201ENST00000507171 1300 ntBASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.43□□□□□ -2.34
CCDC171Q6TFL3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 RNA5SP325-201ENST00000363756 130 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AL031577.2-201ENST00000404133 280 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC114878.1-201ENST00000441166 358 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 RNU1-131P-201ENST00000458943 161 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 MTND1P16-201ENST00000465177 898 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 COX6CP6-201ENST00000490840 228 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC009646.1-201ENST00000510455 318 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 SNORA31.19-201ENST00000517079 126 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 RNA5SP437-201ENST00000517249 129 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 SNRPGP1-201ENST00000553864 222 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 AC243994.1-201ENST00000618627 109 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 MIR3529-201ENST00000637713 78 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 LINC02555-201ENST00000563933 1951 ntBASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC171Q6TFL3 MIR194-1-201ENST00000384892 85 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 TXNL1P1-201ENST00000429528 554 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 MTCYBP15-201ENST00000433123 1127 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 MTND4P6-201ENST00000438297 472 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 SNORD124-201ENST00000459577 104 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 RNU5A-4P-201ENST00000516588 111 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 SNORA76.2-201ENST00000517095 137 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AC122134.1-202ENST00000569111 1201 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AC136618.2-201ENST00000575091 400 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 BNIP3P9-201ENST00000603714 553 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AC130324.3-201ENST00000614165 542 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 AL157770.1-201ENST00000623049 439 ntBASIC0.41□□□□□ -2.34
CCDC171Q6TFL3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 MIR605-201ENST00000385078 83 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 AL356776.1-201ENST00000406574 447 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 MTND2P20-201ENST00000440805 661 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 ELOCP30-201ENST00000447108 299 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 HMGB1P28-201ENST00000507778 552 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 RNA5SP481-201ENST00000516814 122 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 BNIP3P30-201ENST00000601184 574 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 BNIP3P31-201ENST00000604515 566 ntBASIC0.4□□□□□ -2.34
CCDC171Q6TFL3 AC100814.1-201ENST00000606963 623 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms