Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC090543.2-201ENST00000483963 348 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC004057.1-201ENST00000485827 348 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC074198.2-201ENST00000508153 258 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.679-201ENST00000516416 91 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 CKS1BP7-201ENST00000522230 235 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 RPL21P9-201ENST00000556149 474 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC021231.3-201ENST00000558497 370 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL078605.1-201ENST00000603529 500 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 MIR3529-201ENST00000637713 78 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC007656.2-201ENST00000624902 4547 ntBASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1Q5Y7H0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC092268.1-201ENST00000342691 405 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.275-201ENST00000364726 110 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-662P-201ENST00000384253 104 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-378P-201ENST00000384324 107 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RPL23AP48-201ENST00000406913 488 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.590-201ENST00000410140 107 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNA5SP306-201ENST00000411087 107 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC012306.1-201ENST00000423267 114 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC083863.1-201ENST00000438811 231 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 MRPS10P1-201ENST00000448483 130 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC091959.1-201ENST00000495857 238 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.683-201ENST00000516508 93 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 SNORA31.16-201ENST00000516773 139 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 ACA59.2-201ENST00000517061 156 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 CYCSP30-201ENST00000546447 172 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC011602.1-201ENST00000546484 331 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC006199.1-201ENST00000548728 219 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 HMGN2P15-201ENST00000585707 270 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC011921.3-201ENST00000605540 361 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC006001.4-201ENST00000622243 395 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC110491.1-201ENST00000562191 2010 ntBASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DQA1Q5Y7H0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.230-201ENST00000364348 109 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNA5SP479-201ENST00000364858 117 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-514P-201ENST00000384208 107 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 SNORA3.3-201ENST00000408712 125 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU2-61P-201ENST00000411069 191 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RPL19P1-201ENST00000411635 428 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC092017.2-201ENST00000427600 362 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 MTCO1P5-201ENST00000433573 344 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RN7SL323P-201ENST00000494712 295 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 YPEL5P3-201ENST00000547227 352 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC055872.1-201ENST00000570978 278 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC090897.2-201ENST00000581715 130 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC005176.2-201ENST00000596933 147 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 Z83818.1-201ENST00000603584 150 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC010999.1-201ENST00000611856 324 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQA1Q5Y7H0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 CUL1P1-201ENST00000509510 2425 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 MIR410-201ENST00000362222 80 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms