Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 SNORA16A-201ENST00000384342 137 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 RNU6-1104P-201ENST00000384723 104 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 MIR548A2-201ENST00000384956 97 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 RNA5SP339-201ENST00000390987 122 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 Y_RNA.601-201ENST00000410500 113 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 AC139453.2-201ENST00000487255 133 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.09□□□□□ -1.27
NCBP3Q53F19 MIR3163-201ENST00000581592 73 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.09□□□□□ -1.27
NCBP3Q53F19 U7.3-201ENST00000616123 62 ntBASIC7.09□□□□□ -1.27
NCBP3Q53F19 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NCBP3Q53F19 BBX-203ENST00000402543 3980 ntTSL 5 BASIC7.09□□□□□ -1.27
NCBP3Q53F19 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.09□□□□□ -1.27
NCBP3Q53F19 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
NCBP3Q53F19 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NCBP3Q53F19 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC7.08□□□□□ -1.28
NCBP3Q53F19 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NCBP3Q53F19 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NCBP3Q53F19 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NCBP3Q53F19 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.08□□□□□ -1.28
NCBP3Q53F19 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NCBP3Q53F19 AL591135.1-201ENST00000401578 5914 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 GHR-202ENST00000357703 4316 ntTSL 5 BASIC7.08□□□□□ -1.28
NCBP3Q53F19 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7.08□□□□□ -1.28
NCBP3Q53F19 AC007738.1-201ENST00000413892 348 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 RNU7-164P-201ENST00000459221 62 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 AC092754.1-201ENST00000472975 479 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 RNU1-61P-201ENST00000516107 151 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 RNU6-948P-201ENST00000516374 107 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 SCARNA16.4-201ENST00000516956 187 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 RN7SKP289-201ENST00000517244 295 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 MIR3609-201ENST00000582661 80 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 MIR4438-201ENST00000585271 93 ntBASIC7.08□□□□□ -1.28
NCBP3Q53F19 AL121839.2-201ENST00000565058 6943 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 AL137141.1-201ENST00000624622 4836 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
NCBP3Q53F19 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 RNU6-1240P-201ENST00000365155 104 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 Y_RNA.437-201ENST00000384113 113 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 RNU6-644P-201ENST00000391155 98 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 RN7SL447P-201ENST00000494711 245 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 RN7SKP282-201ENST00000516824 299 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 AC022523.2-201ENST00000561045 150 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 SNORD95-201ENST00000579879 68 ntBASIC7.07□□□□□ -1.28
NCBP3Q53F19 FTO-223ENST00000640179 210 ntTSL 5 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NCBP3Q53F19 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NCBP3Q53F19 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NCBP3Q53F19 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NCBP3Q53F19 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC7.07□□□□□ -1.28
NCBP3Q53F19 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NCBP3Q53F19 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NCBP3Q53F19 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 RNU6-944P-201ENST00000364023 107 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 SNRPGP13-201ENST00000442212 177 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 RN7SL177P-201ENST00000476596 299 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 RPL7AP6-201ENST00000477943 801 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 RNA5SP309-201ENST00000516670 106 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 RNA5SP373-201ENST00000517271 95 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 MIR3176-201ENST00000582210 90 ntBASIC7.06□□□□□ -1.28
NCBP3Q53F19 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NCBP3Q53F19 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NCBP3Q53F19 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 FAM35CP-201ENST00000554755 2470 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 RNU6-349P-201ENST00000362402 107 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 RNU6-418P-201ENST00000384035 107 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 RN7SL610P-201ENST00000463845 291 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 RN7SL51P-201ENST00000468230 285 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 RPL36AP48-201ENST00000485521 314 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 AC027308.1-201ENST00000517993 110 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 AP004607.2-201ENST00000533949 322 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 TOMM20P2-201ENST00000540082 421 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 AC008739.2-201ENST00000597006 317 ntBASIC7.05□□□□□ -1.28
NCBP3Q53F19 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
NCBP3Q53F19 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NCBP3Q53F19 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
NCBP3Q53F19 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NCBP3Q53F19 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NCBP3Q53F19 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC7.04□□□□□ -1.28
NCBP3Q53F19 RNU6-1099P-201ENST00000363533 107 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 SNORA2.2-201ENST00000365473 135 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 RPL21P3-201ENST00000395517 478 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms