Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.81□□□□□ -1.96
LTBQ06643 UBL5P2-201ENST00000583788 219 ntBASIC2.81□□□□□ -1.96
LTBQ06643 MIR3149-201ENST00000584629 83 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AC006006.1-201ENST00000603082 144 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AC018889.1-201ENST00000605372 397 ntBASIC2.81□□□□□ -1.96
LTBQ06643 Z69720.2-201ENST00000624755 279 ntBASIC2.81□□□□□ -1.96
LTBQ06643 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LTBQ06643 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.81□□□□□ -1.96
LTBQ06643 AC005592.1-201ENST00000566527 1640 ntBASIC2.81□□□□□ -1.96
LTBQ06643 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.81□□□□□ -1.96
LTBQ06643 AC008264.2-201ENST00000610193 3731 ntBASIC2.8□□□□□ -1.96
LTBQ06643 AL136360.1-201ENST00000503377 1900 ntBASIC2.8□□□□□ -1.96
LTBQ06643 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBQ06643 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
LTBQ06643 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LTBQ06643 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
LTBQ06643 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RNU6-1317P-201ENST00000364582 104 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RNU6-450P-201ENST00000364654 107 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RNU6-99P-201ENST00000364721 107 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RNU6-827P-201ENST00000365553 106 ntBASIC2.8□□□□□ -1.96
LTBQ06643 SNORA7.4-201ENST00000384249 137 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RNU6-166P-201ENST00000384371 107 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RNU6-505P-201ENST00000384427 107 ntBASIC2.8□□□□□ -1.96
LTBQ06643 MIR10A-201ENST00000385043 110 ntBASIC2.8□□□□□ -1.96
LTBQ06643 SNORA40C-201ENST00000391285 128 ntBASIC2.8□□□□□ -1.96
LTBQ06643 MIR1290-201ENST00000408735 78 ntBASIC2.8□□□□□ -1.96
LTBQ06643 U3.42-201ENST00000408746 214 ntBASIC2.8□□□□□ -1.96
LTBQ06643 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBQ06643 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LTBQ06643 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.8□□□□□ -1.96
LTBQ06643 AC244505.4-201ENST00000434905 287 ntBASIC2.8□□□□□ -1.96
LTBQ06643 AL513043.1-201ENST00000439124 535 ntBASIC2.8□□□□□ -1.96
LTBQ06643 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.8□□□□□ -1.96
LTBQ06643 DAP3P1-201ENST00000441522 278 ntBASIC2.8□□□□□ -1.96
LTBQ06643 SSXP5-201ENST00000443473 287 ntBASIC2.8□□□□□ -1.96
LTBQ06643 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LTBQ06643 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBQ06643 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RPL9P9-202ENST00000466501 579 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RPL23AP45-201ENST00000476406 468 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RN7SL20P-201ENST00000488827 297 ntBASIC2.8□□□□□ -1.96
LTBQ06643 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.8□□□□□ -1.96
LTBQ06643 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBQ06643 RNA5SP356-201ENST00000515972 94 ntBASIC2.8□□□□□ -1.96
LTBQ06643 IGHV3-76-201ENST00000522465 295 ntBASIC2.8□□□□□ -1.96
LTBQ06643 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.8□□□□□ -1.96
LTBQ06643 MIR4273-201ENST00000582824 84 ntBASIC2.8□□□□□ -1.96
LTBQ06643 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
LTBQ06643 AC004805.2-201ENST00000605382 482 ntBASIC2.8□□□□□ -1.96
LTBQ06643 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.8□□□□□ -1.96
LTBQ06643 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.8□□□□□ -1.96
LTBQ06643 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LTBQ06643 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LTBQ06643 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LTBQ06643 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LTBQ06643 AC008568.2-201ENST00000623862 2313 ntBASIC2.79□□□□□ -1.96
LTBQ06643 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
LTBQ06643 Y_RNA.193-201ENST00000363979 102 ntBASIC2.79□□□□□ -1.96
LTBQ06643 U8.8-201ENST00000365399 135 ntBASIC2.79□□□□□ -1.96
LTBQ06643 RNU6-741P-201ENST00000383889 107 ntBASIC2.79□□□□□ -1.96
LTBQ06643 MIR325-201ENST00000385260 98 ntBASIC2.79□□□□□ -1.96
LTBQ06643 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LTBQ06643 RNU6-823P-201ENST00000391042 103 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
LTBQ06643 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.79□□□□□ -1.96
LTBQ06643 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.79□□□□□ -1.96
LTBQ06643 AL627311.1-201ENST00000431514 115 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AC009237.8-201ENST00000445492 379 ntBASIC2.79□□□□□ -1.96
LTBQ06643 HIGD1AP2-201ENST00000446367 280 ntBASIC2.79□□□□□ -1.96
LTBQ06643 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.79□□□□□ -1.96
LTBQ06643 RNU6-1037P-201ENST00000459571 107 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AC109925.1-201ENST00000478069 331 ntBASIC2.79□□□□□ -1.96
LTBQ06643 TRBV12-1-201ENST00000479785 344 ntBASIC2.79□□□□□ -1.96
LTBQ06643 RPL17P19-201ENST00000489069 552 ntBASIC2.79□□□□□ -1.96
LTBQ06643 GNAI2P1-201ENST00000541815 315 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AC103996.1-201ENST00000555468 102 ntBASIC2.79□□□□□ -1.96
LTBQ06643 TRAV28-201ENST00000557548 323 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.79□□□□□ -1.96
LTBQ06643 AL158827.2-201ENST00000602494 330 ntBASIC2.79□□□□□ -1.96
LTBQ06643 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AL606534.2-204ENST00000635008 178 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AL691447.3-201ENST00000635020 330 ntBASIC2.79□□□□□ -1.96
LTBQ06643 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LTBQ06643 ZNF72P-201ENST00000425869 1908 ntBASIC2.79□□□□□ -1.96
LTBQ06643 AC007785.2-201ENST00000598627 1916 ntBASIC2.79□□□□□ -1.96
LTBQ06643 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.79□□□□□ -1.96
LTBQ06643 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.79□□□□□ -1.96
LTBQ06643 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.79□□□□□ -1.96
LTBQ06643 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LTBQ06643 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LTBQ06643 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LTBQ06643 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
LTBQ06643 CUL1P1-201ENST00000509510 2425 ntBASIC2.78□□□□□ -1.96
LTBQ06643 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LTBQ06643 AL355596.1-201ENST00000565399 3996 ntBASIC2.78□□□□□ -1.96
LTBQ06643 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LTBQ06643 Y_RNA.149-201ENST00000363558 117 ntBASIC2.78□□□□□ -1.96
LTBQ06643 RNY3P11-201ENST00000364153 102 ntBASIC2.78□□□□□ -1.96
LTBQ06643 Y_RNA.314-201ENST00000365114 102 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms