Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.1□□□□□ -1.91
E2F1Q01094 MTND3P9-201ENST00000429526 346 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AL353997.1-201ENST00000432936 108 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.1□□□□□ -1.91
E2F1Q01094 AC099799.1-201ENST00000439809 192 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.1□□□□□ -1.91
E2F1Q01094 HMGN2P10-201ENST00000448085 265 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AC125238.1-201ENST00000448842 249 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.1□□□□□ -1.91
E2F1Q01094 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.1□□□□□ -1.91
E2F1Q01094 MTND4LP22-201ENST00000508209 276 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 RNU6-1137P-201ENST00000517073 99 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AC023442.1-201ENST00000531247 422 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.1□□□□□ -1.91
E2F1Q01094 DNAJC8P1-201ENST00000554535 372 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 MIR5696-201ENST00000578474 85 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 MIR4680-201ENST00000580906 66 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AC136443.5-201ENST00000603741 370 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AC006157.1-201ENST00000611750 366 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AL138880.2-201ENST00000616214 239 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.1□□□□□ -1.91
E2F1Q01094 AC110491.1-201ENST00000562191 2010 ntBASIC3.1□□□□□ -1.91
E2F1Q01094 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
E2F1Q01094 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.1□□□□□ -1.91
E2F1Q01094 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
E2F1Q01094 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
E2F1Q01094 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
E2F1Q01094 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.91
E2F1Q01094 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
E2F1Q01094 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
E2F1Q01094 RNU6-227P-201ENST00000362865 103 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 Y_RNA.364-201ENST00000365532 101 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 Y_RNA.533-201ENST00000384596 114 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
E2F1Q01094 MRPS18CP6-201ENST00000423587 223 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 AL160004.2-201ENST00000432935 350 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 HMGN2P20-201ENST00000437531 273 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.09□□□□□ -1.91
E2F1Q01094 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
E2F1Q01094 SNORA31.18-201ENST00000517043 134 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
E2F1Q01094 AC010186.2-204ENST00000537668 439 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.09□□□□□ -1.91
E2F1Q01094 MIR4474-201ENST00000579189 78 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 AC008737.2-201ENST00000599446 118 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 HMGB1P24-202ENST00000615653 685 ntBASIC3.09□□□□□ -1.91
E2F1Q01094 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
E2F1Q01094 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
E2F1Q01094 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
E2F1Q01094 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
E2F1Q01094 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
E2F1Q01094 AF117829.1-206ENST00000621883 3802 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
E2F1Q01094 MTND5P9-201ENST00000503854 1755 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 ZNF299P-201ENST00000406845 1804 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 SNORD50.1-201ENST00000362987 71 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 RNY1P16-201ENST00000363063 111 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 Y_RNA.577-201ENST00000384794 101 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
E2F1Q01094 RNA5SP38-201ENST00000410750 119 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 NUP35P1-201ENST00000422734 947 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.08□□□□□ -1.92
E2F1Q01094 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.08□□□□□ -1.92
E2F1Q01094 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 SSXP4-201ENST00000451349 245 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 AC010099.1-201ENST00000455434 375 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 snoU13.28-201ENST00000459235 104 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 AC116655.1-201ENST00000508324 901 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
E2F1Q01094 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.08□□□□□ -1.92
E2F1Q01094 AC021739.1-201ENST00000559631 174 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.08□□□□□ -1.92
E2F1Q01094 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
E2F1Q01094 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 RPL12P50-201ENST00000603116 116 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 AC006023.1-201ENST00000603944 259 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 AC009318.2-201ENST00000610917 651 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 AC068831.7-201ENST00000616954 363 ntBASIC3.08□□□□□ -1.92
E2F1Q01094 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
E2F1Q01094 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
E2F1Q01094 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
E2F1Q01094 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
E2F1Q01094 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
E2F1Q01094 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.07□□□□□ -1.92
E2F1Q01094 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.07□□□□□ -1.92
E2F1Q01094 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
E2F1Q01094 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
E2F1Q01094 AC010680.1-201ENST00000590024 3590 ntBASIC3.07□□□□□ -1.92
E2F1Q01094 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms