Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 Y_RNA.333-201ENST00000365274 102 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 RNU6-933P-201ENST00000384424 107 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 MIR548F5-201ENST00000408421 86 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 CYCSP48-201ENST00000417124 323 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.33□□□□□ -2.04
CX3CL1P78423 AL139396.1-201ENST00000421137 167 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 RPL23AP95-201ENST00000426806 265 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 MTND3P9-201ENST00000429526 346 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 RPS29P6-201ENST00000438196 145 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AL445687.1-201ENST00000439946 251 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
CX3CL1P78423 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.33□□□□□ -2.04
CX3CL1P78423 MRPL50P4-201ENST00000446432 475 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 snoU13.14-201ENST00000459372 104 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
CX3CL1P78423 SNRPGP7-201ENST00000469016 106 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 MTND5P5-201ENST00000503764 376 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AC103851.1-201ENST00000506833 274 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AC091874.1-201ENST00000511402 339 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 PTP4A1P4-201ENST00000512479 322 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AC091826.1-201ENST00000514065 313 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 RN7SKP40-201ENST00000517211 242 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.33□□□□□ -2.04
CX3CL1P78423 AC005668.1-201ENST00000571142 476 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.33□□□□□ -2.04
CX3CL1P78423 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.33□□□□□ -2.04
CX3CL1P78423 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CX3CL1P78423 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.33□□□□□ -2.04
CX3CL1P78423 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CX3CL1P78423 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.32□□□□□ -2.04
CX3CL1P78423 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.32□□□□□ -2.04
CX3CL1P78423 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CX3CL1P78423 SNORD62.1-201ENST00000362541 86 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 RNU6-227P-201ENST00000362865 103 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 RNU6-1285P-201ENST00000363480 105 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 RNU6-1141P-201ENST00000364520 107 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 SNORA9.2-201ENST00000365361 133 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CX3CL1P78423 MIR517A-201ENST00000385001 87 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 MIR548K-201ENST00000408406 116 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AIMP1P2-201ENST00000425294 312 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 HMGB1P18-201ENST00000438801 619 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 USP9YP8-201ENST00000441913 500 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AL353572.1-201ENST00000442490 417 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.32□□□□□ -2.04
CX3CL1P78423 AC080013.2-201ENST00000460866 323 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AL121594.1-201ENST00000475906 575 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AC140059.1-201ENST00000489238 361 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 SCGB1D5P-201ENST00000515134 247 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 RNU2-53P-201ENST00000516257 147 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 RNU6-826P-201ENST00000516827 104 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.32□□□□□ -2.04
CX3CL1P78423 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.32□□□□□ -2.04
CX3CL1P78423 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.32□□□□□ -2.04
CX3CL1P78423 AC027176.1-201ENST00000560204 514 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 MIR4325-201ENST00000583049 90 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 UBE2V2P2-201ENST00000587677 504 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AL161423.1-201ENST00000613700 262 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AC092794.2-201ENST00000620933 563 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.32□□□□□ -2.04
CX3CL1P78423 AL035425.3-201ENST00000564206 4996 ntBASIC2.32□□□□□ -2.04
CX3CL1P78423 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.32□□□□□ -2.04
CX3CL1P78423 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CX3CL1P78423 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CX3CL1P78423 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.31□□□□□ -2.04
CX3CL1P78423 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CX3CL1P78423 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CX3CL1P78423 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.31□□□□□ -2.04
CX3CL1P78423 RNU6-655P-201ENST00000362858 107 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 RNU6-1210P-201ENST00000363775 107 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 RNU6-790P-201ENST00000384479 105 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 RNU6-851P-201ENST00000384565 107 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 RNU6-306P-201ENST00000384617 107 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 MIR521-1-201ENST00000384902 87 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 AL356432.1-201ENST00000405809 419 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CL1P78423 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.31□□□□□ -2.04
CX3CL1P78423 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CL1P78423 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CL1P78423 PCMTD1P1-201ENST00000455560 355 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 AC008571.1-201ENST00000467232 300 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CL1P78423 AC083906.5-201ENST00000503722 328 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 AC114801.2-201ENST00000503825 781 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CL1P78423 AP005902.1-201ENST00000521358 186 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 AC134698.4-201ENST00000523451 826 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CL1P78423 AC093249.1-201ENST00000567049 203 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.31□□□□□ -2.04
CX3CL1P78423 AL356157.2-201ENST00000605122 111 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 MIR3976-201ENST00000606807 139 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 TPTEP1-208ENST00000636884 213 ntBASIC2.31□□□□□ -2.04
CX3CL1P78423 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CX3CL1P78423 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CX3CL1P78423 MIR491-201ENST00000384877 84 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 SNORA48.5-201ENST00000391143 135 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms