Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 Y_RNA.597-201ENST00000410463 100 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.53□□□□□ -2.16
EIF3EP60228 NCOR1P3-201ENST00000420479 303 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 TOMM20P4-201ENST00000427861 435 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 CBX3P6-201ENST00000430257 527 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.53□□□□□ -2.16
EIF3EP60228 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.53□□□□□ -2.16
EIF3EP60228 AL360221.1-201ENST00000445989 335 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 RPL39P29-201ENST00000447779 157 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.53□□□□□ -2.16
EIF3EP60228 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.53□□□□□ -2.16
EIF3EP60228 AC009646.1-201ENST00000510455 318 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.53□□□□□ -2.16
EIF3EP60228 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.53□□□□□ -2.16
EIF3EP60228 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.53□□□□□ -2.16
EIF3EP60228 AP002453.2-201ENST00000533503 320 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.53□□□□□ -2.16
EIF3EP60228 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.53□□□□□ -2.16
EIF3EP60228 Z69720.2-201ENST00000624755 279 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 U4.7-201ENST00000638126 106 ntBASIC1.53□□□□□ -2.16
EIF3EP60228 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.17
EIF3EP60228 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
EIF3EP60228 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.52□□□□□ -2.17
EIF3EP60228 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 MTND5P17-201ENST00000418405 1603 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 RNU5E-7P-201ENST00000365290 117 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 RNU6-160P-201ENST00000384591 107 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 OR6C66P-201ENST00000414917 930 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AL590556.1-201ENST00000423231 483 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AL513185.2-201ENST00000425543 193 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.52□□□□□ -2.17
EIF3EP60228 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.52□□□□□ -2.17
EIF3EP60228 AL357134.1-201ENST00000445848 426 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AL035666.1-201ENST00000446195 348 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 MTCYBP1-201ENST00000454315 1119 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AL122001.1-201ENST00000457027 370 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.52□□□□□ -2.17
EIF3EP60228 AC104806.1-201ENST00000508720 308 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC093259.1-201ENST00000509755 300 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 Vault.3-201ENST00000516676 95 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.52□□□□□ -2.17
EIF3EP60228 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.52□□□□□ -2.17
EIF3EP60228 AP003072.2-201ENST00000527756 676 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.52□□□□□ -2.17
EIF3EP60228 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.52□□□□□ -2.17
EIF3EP60228 MIR548AB-201ENST00000584917 84 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC022022.2-201ENST00000602989 360 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC090578.1-201ENST00000604955 591 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AC092354.1-201ENST00000606057 376 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 AL133173.2-201ENST00000614270 90 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
EIF3EP60228 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
EIF3EP60228 Y_RNA.367-201ENST00000365544 101 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 HIGD1AP15-201ENST00000416198 280 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 C1DP2-201ENST00000418167 426 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.51□□□□□ -2.17
EIF3EP60228 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.51□□□□□ -2.17
EIF3EP60228 AC073614.1-201ENST00000438690 650 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.51□□□□□ -2.17
EIF3EP60228 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.51□□□□□ -2.17
EIF3EP60228 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.51□□□□□ -2.17
EIF3EP60228 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 AC114801.2-201ENST00000503825 781 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 MTND2P33-201ENST00000506452 1031 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.51□□□□□ -2.17
EIF3EP60228 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
EIF3EP60228 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.51□□□□□ -2.17
EIF3EP60228 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
EIF3EP60228 AC063943.3-201ENST00000615562 356 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 AL603839.4-201ENST00000624658 1005 ntBASIC1.51□□□□□ -2.17
EIF3EP60228 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
EIF3EP60228 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EIF3EP60228 Y_RNA.67-201ENST00000362870 100 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-23P-201ENST00000363283 107 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-1285P-201ENST00000363480 105 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 SNORA62.1-201ENST00000364287 154 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 SNORA72.3-201ENST00000365074 132 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-45P-201ENST00000384471 107 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-1222P-201ENST00000384615 107 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-550P-201ENST00000391057 101 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RPS3AP3-201ENST00000411933 242 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.5□□□□□ -2.17
EIF3EP60228 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EIF3EP60228 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.5□□□□□ -2.17
EIF3EP60228 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 SNRPFP4-201ENST00000456366 242 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.5□□□□□ -2.17
EIF3EP60228 RN7SL429P-201ENST00000479090 223 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RN7SL489P-201ENST00000486185 223 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.5□□□□□ -2.17
EIF3EP60228 RN7SL327P-201ENST00000488659 223 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms