Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC093663.1-201ENST00000497190 394 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.96□□□□□ -1.78
RTP1P59025 AL451007.1-201ENST00000595491 289 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.96□□□□□ -1.78
RTP1P59025 Y_RNA.772-201ENST00000606692 102 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AC240442.1-201ENST00000616055 283 ntBASIC3.96□□□□□ -1.78
RTP1P59025 U4.6-201ENST00000621618 127 ntBASIC3.96□□□□□ -1.78
RTP1P59025 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RTP1P59025 AL359693.1-201ENST00000614959 2407 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AC058791.1-201ENST00000608412 3198 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTP1P59025 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.95□□□□□ -1.78
RTP1P59025 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.95□□□□□ -1.78
RTP1P59025 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
RTP1P59025 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.95□□□□□ -1.78
RTP1P59025 Y_RNA.200-201ENST00000364018 102 ntBASIC3.95□□□□□ -1.78
RTP1P59025 COTL1P1-201ENST00000422309 375 ntBASIC3.95□□□□□ -1.78
RTP1P59025 Z82188.1-201ENST00000436709 154 ntBASIC3.95□□□□□ -1.78
RTP1P59025 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.95□□□□□ -1.78
RTP1P59025 AL392103.1-201ENST00000447000 198 ntBASIC3.95□□□□□ -1.78
RTP1P59025 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.95□□□□□ -1.78
RTP1P59025 AP000873.1-201ENST00000463987 400 ntBASIC3.95□□□□□ -1.78
RTP1P59025 MED28P2-201ENST00000475771 317 ntBASIC3.95□□□□□ -1.78
RTP1P59025 AC010265.1-201ENST00000513509 211 ntBASIC3.95□□□□□ -1.78
RTP1P59025 RNU6-1012P-201ENST00000516606 109 ntBASIC3.95□□□□□ -1.78
RTP1P59025 SNORA31.18-201ENST00000517043 134 ntBASIC3.95□□□□□ -1.78
RTP1P59025 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.95□□□□□ -1.78
RTP1P59025 MIR4643-201ENST00000577473 78 ntBASIC3.95□□□□□ -1.78
RTP1P59025 MIR5680-201ENST00000577577 84 ntBASIC3.95□□□□□ -1.78
RTP1P59025 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.95□□□□□ -1.78
RTP1P59025 AP002826.1-201ENST00000608835 315 ntBASIC3.95□□□□□ -1.78
RTP1P59025 AL162274.2-201ENST00000614406 332 ntBASIC3.95□□□□□ -1.78
RTP1P59025 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.95□□□□□ -1.78
RTP1P59025 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.95□□□□□ -1.78
RTP1P59025 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.95□□□□□ -1.78
RTP1P59025 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTP1P59025 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.95□□□□□ -1.78
RTP1P59025 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
RTP1P59025 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTP1P59025 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RTP1P59025 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.95□□□□□ -1.78
RTP1P59025 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.94□□□□□ -1.78
RTP1P59025 CEP170P1-201ENST00000502249 4587 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RNU6-78P-201ENST00000362897 107 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RNU6-774P-201ENST00000363238 107 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RNU6-283P-201ENST00000364788 107 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RNU6-741P-201ENST00000383889 107 ntBASIC3.94□□□□□ -1.78
RTP1P59025 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RTP1P59025 MIR1290-201ENST00000408735 78 ntBASIC3.94□□□□□ -1.78
RTP1P59025 Y_RNA.602-201ENST00000410535 92 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RNU2-68P-201ENST00000410878 191 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RPL21P40-201ENST00000428586 483 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AL591043.1-201ENST00000432461 424 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AL138752.1-201ENST00000452964 351 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AL136097.1-201ENST00000456945 913 ntBASIC3.94□□□□□ -1.78
RTP1P59025 TOMM22P6-201ENST00000465035 409 ntBASIC3.94□□□□□ -1.78
RTP1P59025 S100A11P2-201ENST00000467589 312 ntBASIC3.94□□□□□ -1.78
RTP1P59025 RN7SL594P-201ENST00000470590 287 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AC078817.1-201ENST00000492623 435 ntBASIC3.94□□□□□ -1.78
RTP1P59025 SCARNA24.2-201ENST00000516968 130 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AC022868.1-201ENST00000517767 391 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AC010186.2-204ENST00000537668 439 ntBASIC3.94□□□□□ -1.78
RTP1P59025 AC023824.2-201ENST00000566185 400 ntBASIC3.94□□□□□ -1.78
RTP1P59025 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
RTP1P59025 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RTP1P59025 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTP1P59025 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTP1P59025 PCNPP3-201ENST00000393579 471 ntBASIC3.93□□□□□ -1.78
RTP1P59025 MIR1298-201ENST00000408783 112 ntBASIC3.93□□□□□ -1.78
RTP1P59025 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.93□□□□□ -1.78
RTP1P59025 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.93□□□□□ -1.78
RTP1P59025 AC098614.2-201ENST00000426040 255 ntBASIC3.93□□□□□ -1.78
RTP1P59025 SNRPGP5-201ENST00000456003 220 ntBASIC3.93□□□□□ -1.78
RTP1P59025 U3.44-201ENST00000458938 192 ntBASIC3.93□□□□□ -1.78
RTP1P59025 snoU13.30-201ENST00000458951 104 ntBASIC3.93□□□□□ -1.78
RTP1P59025 SNORA70.16-201ENST00000516390 95 ntBASIC3.93□□□□□ -1.78
RTP1P59025 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.93□□□□□ -1.78
RTP1P59025 AC090617.3-201ENST00000573670 475 ntBASIC3.93□□□□□ -1.78
RTP1P59025 AC010928.2-201ENST00000588017 287 ntBASIC3.93□□□□□ -1.78
RTP1P59025 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.93□□□□□ -1.78
RTP1P59025 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
RTP1P59025 AC011476.5-201ENST00000615594 130 ntBASIC3.93□□□□□ -1.78
RTP1P59025 AC091903.1-201ENST00000624322 454 ntBASIC3.93□□□□□ -1.78
RTP1P59025 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.93□□□□□ -1.78
RTP1P59025 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTP1P59025 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.93□□□□□ -1.78
RTP1P59025 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTP1P59025 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTP1P59025 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
RTP1P59025 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RTP1P59025 SNORD113-8-201ENST00000363497 74 ntBASIC3.92□□□□□ -1.78
RTP1P59025 RNU6-72P-201ENST00000384285 79 ntBASIC3.92□□□□□ -1.78
RTP1P59025 RNU6-937P-201ENST00000384325 106 ntBASIC3.92□□□□□ -1.78
RTP1P59025 SNORA19-201ENST00000384737 128 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms