Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC01399-202ENST00000458450 244 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 U8.18-201ENST00000459285 133 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
CLRN1P58418 AC067942.3-201ENST00000512025 362 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.18□□□□□ -1.9
CLRN1P58418 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLRN1P58418 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLRN1P58418 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.18□□□□□ -1.9
CLRN1P58418 AC090897.2-201ENST00000581715 130 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 MFSD8-236ENST00000641509 4050 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.18□□□□□ -1.9
CLRN1P58418 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLRN1P58418 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLRN1P58418 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.18□□□□□ -1.9
CLRN1P58418 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
CLRN1P58418 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLRN1P58418 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLRN1P58418 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.17□□□□□ -1.9
CLRN1P58418 RNU6-1301P-201ENST00000362724 104 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNA5SP51-201ENST00000364750 119 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU6-487P-201ENST00000365430 104 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU1-64P-201ENST00000365443 163 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AL359837.1-201ENST00000381357 287 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU6-907P-201ENST00000390924 102 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 PTMAP5-201ENST00000393073 333 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 UBA52P6-201ENST00000399822 382 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU6-121P-201ENST00000410525 99 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RN7SKP61-201ENST00000410642 295 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU2-49P-201ENST00000410666 184 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 CYCSP19-201ENST00000411715 316 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 PTGES3P4-201ENST00000426243 356 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 ARF4P2-201ENST00000430209 526 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AC244670.1-201ENST00000436879 112 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.17□□□□□ -1.9
CLRN1P58418 RPS29P31-201ENST00000446147 164 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU7-23P-201ENST00000459465 62 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AP000870.1-201ENST00000472927 406 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
CLRN1P58418 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.17□□□□□ -1.9
CLRN1P58418 RN7SKP18-201ENST00000516005 275 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RNU6-794P-201ENST00000517261 64 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.17□□□□□ -1.9
CLRN1P58418 AP003733.2-201ENST00000529409 171 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.17□□□□□ -1.9
CLRN1P58418 AC023157.2-201ENST00000540596 141 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 MIR5571-201ENST00000577998 113 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 AC091152.3-201ENST00000604227 325 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLRN1P58418 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
CLRN1P58418 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLRN1P58418 AC010680.1-201ENST00000590024 3590 ntBASIC3.17□□□□□ -1.9
CLRN1P58418 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.17□□□□□ -1.9
CLRN1P58418 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.16□□□□□ -1.9
CLRN1P58418 RNU6-379P-201ENST00000363813 104 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 RNU6-19P-201ENST00000384718 107 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLRN1P58418 RNU6ATAC-201ENST00000408749 126 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 RN7SKP202-201ENST00000410439 330 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 RNU6-1140P-201ENST00000410517 106 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 ATP5A1P2-201ENST00000412323 255 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 RPL21P38-201ENST00000418090 167 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.16□□□□□ -1.9
CLRN1P58418 AC002075.2-201ENST00000425207 252 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 SDAD1P3-201ENST00000427380 333 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AC078809.1-201ENST00000427601 140 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.16□□□□□ -1.9
CLRN1P58418 AC091286.1-201ENST00000431233 461 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.16□□□□□ -1.9
CLRN1P58418 AP002884.2-201ENST00000471647 395 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.16□□□□□ -1.9
CLRN1P58418 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.16□□□□□ -1.9
CLRN1P58418 RNU2-53P-201ENST00000516257 147 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 RNU6-570P-201ENST00000517051 105 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.16□□□□□ -1.9
CLRN1P58418 MIR4738-201ENST00000579134 87 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 MIR5047-201ENST00000579212 100 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AL355877.2-201ENST00000603670 358 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AL359198.2-201ENST00000611836 194 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AC006111.3-201ENST00000622137 383 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 AL450472.1-202ENST00000637286 180 ntBASIC3.16□□□□□ -1.9
CLRN1P58418 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLRN1P58418 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
CLRN1P58418 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.16□□□□□ -1.9
CLRN1P58418 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.16□□□□□ -1.9
CLRN1P58418 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.15□□□□□ -1.9
CLRN1P58418 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLRN1P58418 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CLRN1P58418 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.9
CLRN1P58418 AC010615.1-201ENST00000594254 1764 ntBASIC3.15□□□□□ -1.9
CLRN1P58418 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLRN1P58418 HSPA8P1-201ENST00000425843 1833 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.15□□□□□ -1.91
CLRN1P58418 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 RNU6-1285P-201ENST00000363480 105 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 Y_RNA.439-201ENST00000384119 94 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 U8.10-201ENST00000384260 133 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 MIR487A-201ENST00000385009 80 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms