Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC104010.1-201ENST00000616889 150 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AL159153.1-201ENST00000619688 317 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AC022306.3-201ENST00000619930 550 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 MIR1248-201ENST00000629190 106 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN6P56747 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CLDN6P56747 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CLDN6P56747 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLDN6P56747 SNORD114-27-201ENST00000363766 70 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 RNU6-501P-201ENST00000364072 100 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLDN6P56747 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 RAP1BP3-201ENST00000407180 549 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 RNU2-39P-201ENST00000410604 198 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.42□□□□□ -2.18
CLDN6P56747 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN6P56747 C1DP2-201ENST00000418167 426 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 ELOCP4-201ENST00000420090 333 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 RPL39P29-201ENST00000447779 157 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 AC027575.1-201ENST00000481064 460 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN6P56747 MTND2P33-201ENST00000506452 1031 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 MTCO3P9-201ENST00000506989 781 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 RBBP4P6-201ENST00000508098 202 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
CLDN6P56747 RNU1-86P-201ENST00000516108 154 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 RNU1-107P-201ENST00000516617 154 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN6P56747 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN6P56747 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.42□□□□□ -2.18
CLDN6P56747 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.42□□□□□ -2.18
CLDN6P56747 PCMTD1P2-201ENST00000565017 355 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 AC091135.1-201ENST00000585943 307 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN6P56747 AC016925.2-201ENST00000605108 242 ntBASIC1.42□□□□□ -2.18
CLDN6P56747 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN6P56747 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN6P56747 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 RNU6-78P-201ENST00000362897 107 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 RNU6-23P-201ENST00000363283 107 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 SNORA48.1-201ENST00000390879 135 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 EEF1A1P40-201ENST00000412883 573 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 RPL21P90-201ENST00000415692 466 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 MED13P1-201ENST00000428342 171 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 CBX3P6-201ENST00000430257 527 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 AL122001.1-201ENST00000457027 370 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 MTND3P3-201ENST00000505004 126 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 AC092436.3-201ENST00000511788 257 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 RNU6-311P-201ENST00000516224 102 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN6P56747 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN6P56747 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN6P56747 AC137800.2-201ENST00000574375 120 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 AL136363.2-201ENST00000604173 851 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 AC080078.3-201ENST00000605407 463 ntBASIC1.41□□□□□ -2.18
CLDN6P56747 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.4□□□□□ -2.19
CLDN6P56747 CBX3P1-201ENST00000325243 554 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-1-201ENST00000383898 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-42P-201ENST00000384165 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-36P-201ENST00000384172 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-4P-201ENST00000384205 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-5P-201ENST00000384238 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-3P-201ENST00000384314 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-2-201ENST00000384627 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-9-201ENST00000384776 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-33P-201ENST00000384793 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 MIR558-201ENST00000384920 94 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 MIR30A-201ENST00000385092 71 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 Y_RNA.608-201ENST00000410647 95 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 MTATP6P19-201ENST00000413797 659 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CLDN6P56747 AC098592.1-201ENST00000419352 333 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AL589872.1-201ENST00000426602 288 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AL365184.2-201ENST00000431139 435 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AL606662.1-201ENST00000445763 553 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.4□□□□□ -2.19
CLDN6P56747 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN6P56747 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN6P56747 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.4□□□□□ -2.19
CLDN6P56747 FAM206BP-201ENST00000510179 541 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN6P56747 AP002453.2-201ENST00000533503 320 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AL356057.1-201ENST00000533798 831 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 MIR5697-201ENST00000578045 78 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 MIR5692A1-201ENST00000580523 69 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AC022022.2-201ENST00000602989 360 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RNU6-6P-201ENST00000606623 107 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 RMST_7.1-201ENST00000621935 268 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AC130454.1-201ENST00000622948 401 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 AC019226.2-201ENST00000625973 424 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CLDN6P56747 AL133216.2-202ENST00000634512 349 ntBASIC1.4□□□□□ -2.19
CLDN6P56747 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CLDN6P56747 ZNF680P1-201ENST00000436625 1469 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 SNORD113-6-201ENST00000363345 75 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 RNY1-201ENST00000364228 113 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 RNU6-371P-201ENST00000364283 108 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms