Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.76□□□□□ -2.13
PKNOX1P55347 AC091135.1-201ENST00000585943 307 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC087752.4-201ENST00000605911 462 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-6P-201ENST00000606623 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
PKNOX1P55347 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
PKNOX1P55347 AL132822.1-201ENST00000617063 513 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC072046.2-201ENST00000618366 268 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC007792.1-201ENST00000623023 402 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PKNOX1P55347 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 MIR518A2-201ENST00000384966 87 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 RNA5SP450-201ENST00000411206 102 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.75□□□□□ -2.13
PKNOX1P55347 AC096920.1-201ENST00000423991 241 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 USP9YP18-201ENST00000425912 695 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.75□□□□□ -2.13
PKNOX1P55347 DNAJC19P4-201ENST00000440115 345 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 RPL39P29-201ENST00000447779 157 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AL122001.1-201ENST00000457027 370 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 MTCO3P7-201ENST00000510008 774 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.75□□□□□ -2.13
PKNOX1P55347 RNU2-69P-201ENST00000516061 100 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.75□□□□□ -2.13
PKNOX1P55347 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.75□□□□□ -2.13
PKNOX1P55347 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.75□□□□□ -2.13
PKNOX1P55347 AC023050.3-201ENST00000541142 333 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.75□□□□□ -2.13
PKNOX1P55347 Z99497.2-201ENST00000603634 310 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 SNRPGP17-201ENST00000603780 214 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AP001596.2-201ENST00000608410 312 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AC008147.4-201ENST00000617570 1204 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 uc_338.11-201ENST00000619132 160 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 MIR6852-201ENST00000621699 66 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AC078883.4-201ENST00000623218 367 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 AC022418.1-201ENST00000624118 445 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PKNOX1P55347 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.75□□□□□ -2.13
PKNOX1P55347 ZNF680P1-201ENST00000436625 1469 ntBASIC1.75□□□□□ -2.13
PKNOX1P55347 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 RNU6-393P-201ENST00000384475 107 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 SNORD70.1-201ENST00000391007 85 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 MIR1262-201ENST00000408276 93 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 SNORD56-201ENST00000413522 71 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 AL158823.1-201ENST00000418441 478 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.74□□□□□ -2.13
PKNOX1P55347 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.74□□□□□ -2.13
PKNOX1P55347 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.74□□□□□ -2.13
PKNOX1P55347 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.74□□□□□ -2.13
PKNOX1P55347 AL137159.1-201ENST00000452808 512 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 RPL23AP42-201ENST00000471152 471 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.74□□□□□ -2.13
PKNOX1P55347 RN7SKP219-201ENST00000516825 296 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 SNORA25.17-201ENST00000517184 124 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PKNOX1P55347 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
PKNOX1P55347 AC018630.3-201ENST00000542637 96 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 AL391840.1-201ENST00000571144 367 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 AL670379.2-201ENST00000604983 252 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 AC004908.3-201ENST00000610248 625 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 AC104073.3-201ENST00000610942 955 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.74□□□□□ -2.13
PKNOX1P55347 AC091834.1-201ENST00000614543 472 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 Z69908.1-201ENST00000622603 247 ntBASIC1.74□□□□□ -2.13
PKNOX1P55347 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
PKNOX1P55347 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
PKNOX1P55347 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
PKNOX1P55347 ZNF702P-202ENST00000434269 1966 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.73□□□□□ -2.13
PKNOX1P55347 RNU6-527P-201ENST00000363425 104 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 RNU6-546P-201ENST00000383991 107 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 MIR544A-201ENST00000384855 91 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 CETN4P-201ENST00000432407 469 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AL591043.1-201ENST00000432461 424 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 RPS15AP10-201ENST00000432472 382 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 MTND2P29-201ENST00000438595 412 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AC243964.1-201ENST00000441814 261 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 PRPS1P1-201ENST00000445305 876 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.73□□□□□ -2.13
PKNOX1P55347 GMFBP1-201ENST00000467831 427 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 RPL21P99-201ENST00000480369 423 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PKNOX1P55347 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.73□□□□□ -2.13
PKNOX1P55347 LRRC34P2-201ENST00000514850 553 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AC026407.1-201ENST00000518369 204 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AC022616.8-201ENST00000533569 253 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.73□□□□□ -2.13
PKNOX1P55347 MTCO3P23-201ENST00000561363 289 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AGGF1P4-201ENST00000568249 801 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
PKNOX1P55347 MIR4648-201ENST00000580107 72 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AC008752.3-201ENST00000588113 712 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 AC068790.2-201ENST00000602601 557 ntBASIC1.73□□□□□ -2.13
PKNOX1P55347 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms