Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LIM2P55344 AL451074.3-201ENST00000437709 472 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.9□□□□□ -2.11
LIM2P55344 AC011753.1-201ENST00000451001 220 ntBASIC1.9□□□□□ -2.11
LIM2P55344 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.9□□□□□ -2.11
LIM2P55344 AL121594.1-201ENST00000475906 575 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AC079804.2-201ENST00000490376 200 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.9□□□□□ -2.11
LIM2P55344 MTND2P33-201ENST00000506452 1031 ntBASIC1.9□□□□□ -2.11
LIM2P55344 RNA5SP82-201ENST00000516707 92 ntBASIC1.9□□□□□ -2.11
LIM2P55344 HSPE1P18-201ENST00000517602 280 ntBASIC1.9□□□□□ -2.11
LIM2P55344 MTND4P7-201ENST00000523876 130 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AP001893.2-201ENST00000526949 202 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AC115990.1-201ENST00000526957 301 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AC104383.1-201ENST00000530297 370 ntBASIC1.9□□□□□ -2.11
LIM2P55344 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.9□□□□□ -2.11
LIM2P55344 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.9□□□□□ -2.11
LIM2P55344 AC009127.3-201ENST00000570531 403 ntBASIC1.9□□□□□ -2.11
LIM2P55344 MIR4424-201ENST00000585257 86 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AC091135.1-201ENST00000585943 307 ntBASIC1.9□□□□□ -2.11
LIM2P55344 RPL30P11-203ENST00000598995 310 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AL355297.2-201ENST00000604792 129 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AL356157.2-201ENST00000605122 111 ntBASIC1.9□□□□□ -2.11
LIM2P55344 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
LIM2P55344 uc_338.34-201ENST00000617467 174 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
LIM2P55344 MTND4P1-201ENST00000457501 1466 ntBASIC1.89□□□□□ -2.11
LIM2P55344 SNORD56.1-201ENST00000362913 68 ntBASIC1.89□□□□□ -2.11
LIM2P55344 Y_RNA.194-201ENST00000363985 102 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AL079342.1-201ENST00000401460 267 ntBASIC1.89□□□□□ -2.11
LIM2P55344 RN7SKP158-201ENST00000410453 326 ntBASIC1.89□□□□□ -2.11
LIM2P55344 RNU6-1245P-201ENST00000411130 106 ntBASIC1.89□□□□□ -2.11
LIM2P55344 SNORD56-201ENST00000413522 71 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AIMP1P2-201ENST00000425294 312 ntBASIC1.89□□□□□ -2.11
LIM2P55344 VN1R108P-201ENST00000431580 830 ntBASIC1.89□□□□□ -2.11
LIM2P55344 MTND3P21-201ENST00000433774 331 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
LIM2P55344 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.89□□□□□ -2.11
LIM2P55344 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.89□□□□□ -2.11
LIM2P55344 MTCO3P38-201ENST00000468910 766 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC140059.1-201ENST00000489238 361 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.89□□□□□ -2.11
LIM2P55344 AC091885.1-201ENST00000506658 268 ntBASIC1.89□□□□□ -2.11
LIM2P55344 SNORA25.11-201ENST00000515935 105 ntBASIC1.89□□□□□ -2.11
LIM2P55344 RNU6-377P-201ENST00000515965 102 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC022880.1-201ENST00000534017 973 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AL138976.2-201ENST00000563989 694 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.89□□□□□ -2.11
LIM2P55344 RPS3AP23-202ENST00000574601 686 ntBASIC1.89□□□□□ -2.11
LIM2P55344 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AL354950.2-201ENST00000617939 290 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC005858.4-201ENST00000623191 700 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AC139792.3-201ENST00000623525 224 ntBASIC1.89□□□□□ -2.11
LIM2P55344 MIR203B-201ENST00000636080 86 ntBASIC1.89□□□□□ -2.11
LIM2P55344 AL354685.2-201ENST00000448218 1447 ntBASIC1.89□□□□□ -2.11
LIM2P55344 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
LIM2P55344 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.89□□□□□ -2.11
LIM2P55344 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LIM2P55344 AP000560.1-201ENST00000624150 1937 ntBASIC1.88□□□□□ -2.11
LIM2P55344 RNU6-266P-201ENST00000364225 107 ntBASIC1.88□□□□□ -2.11
LIM2P55344 RNU6-1303P-201ENST00000364841 107 ntBASIC1.88□□□□□ -2.11
LIM2P55344 RNU1-148P-201ENST00000384472 162 ntBASIC1.88□□□□□ -2.11
LIM2P55344 MIR29B2-201ENST00000385055 81 ntBASIC1.88□□□□□ -2.11
LIM2P55344 RPS29P13-201ENST00000402041 169 ntBASIC1.88□□□□□ -2.11
LIM2P55344 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
LIM2P55344 MTCYBP8-201ENST00000422855 651 ntBASIC1.88□□□□□ -2.11
LIM2P55344 USP9YP18-201ENST00000425912 695 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AL606489.2-201ENST00000433886 234 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC009238.1-201ENST00000442165 424 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.88□□□□□ -2.11
LIM2P55344 AC009237.6-201ENST00000446969 424 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC090515.1-201ENST00000465295 476 ntBASIC1.88□□□□□ -2.11
LIM2P55344 RPL30P1-201ENST00000488676 339 ntBASIC1.88□□□□□ -2.11
LIM2P55344 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.88□□□□□ -2.11
LIM2P55344 AC107401.1-201ENST00000503426 685 ntBASIC1.88□□□□□ -2.11
LIM2P55344 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
LIM2P55344 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.88□□□□□ -2.11
LIM2P55344 RNU6-586P-201ENST00000517265 104 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
LIM2P55344 CBX3P7-201ENST00000532876 502 ntBASIC1.88□□□□□ -2.11
LIM2P55344 CYCSP26-201ENST00000534107 320 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC018630.3-201ENST00000542637 96 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC090115.3-201ENST00000553218 849 ntBASIC1.88□□□□□ -2.11
LIM2P55344 MTND1P15-201ENST00000579262 949 ntBASIC1.88□□□□□ -2.11
LIM2P55344 MIR3945-201ENST00000581853 98 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.88□□□□□ -2.11
LIM2P55344 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
LIM2P55344 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.88□□□□□ -2.11
LIM2P55344 AL359880.1-201ENST00000621879 266 ntBASIC1.88□□□□□ -2.11
LIM2P55344 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
LIM2P55344 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.88□□□□□ -2.11
LIM2P55344 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.88□□□□□ -2.11
LIM2P55344 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LIM2P55344 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
LIM2P55344 RNU6-37P-201ENST00000362692 107 ntBASIC1.87□□□□□ -2.11
LIM2P55344 RNU6-527P-201ENST00000363425 104 ntBASIC1.87□□□□□ -2.11
LIM2P55344 SNORA3A-201ENST00000364113 130 ntBASIC1.87□□□□□ -2.11
LIM2P55344 RNU6-11P-201ENST00000364234 107 ntBASIC1.87□□□□□ -2.11
LIM2P55344 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LIM2P55344 RNU6-25P-201ENST00000383873 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms