Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SCARNA17.1-201ENST00000516211 143 ntBASIC2.45□□□□□ -2.02
CDH11P55287 SCARNA17.2-201ENST00000516334 143 ntBASIC2.45□□□□□ -2.02
CDH11P55287 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH11P55287 AC104576.1-201ENST00000524225 88 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH11P55287 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.45□□□□□ -2.02
CDH11P55287 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH11P55287 GLYCAM1-201ENST00000546596 285 ntBASIC2.45□□□□□ -2.02
CDH11P55287 TRAV32-201ENST00000553993 340 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AC103996.1-201ENST00000555468 102 ntBASIC2.45□□□□□ -2.02
CDH11P55287 CPDP1-201ENST00000579660 283 ntBASIC2.45□□□□□ -2.02
CDH11P55287 MIR4672-201ENST00000583126 81 ntBASIC2.45□□□□□ -2.02
CDH11P55287 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH11P55287 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.45□□□□□ -2.02
CDH11P55287 SCARNA17.4-201ENST00000614296 143 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AL008636.1-201ENST00000625038 1018 ntBASIC2.45□□□□□ -2.02
CDH11P55287 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH11P55287 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH11P55287 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.44□□□□□ -2.02
CDH11P55287 RNU6-562P-201ENST00000362731 107 ntBASIC2.44□□□□□ -2.02
CDH11P55287 AL445529.1-201ENST00000398713 389 ntBASIC2.44□□□□□ -2.02
CDH11P55287 MTND4LP16-201ENST00000440828 295 ntBASIC2.44□□□□□ -2.02
CDH11P55287 AL031274.1-201ENST00000450334 232 ntBASIC2.44□□□□□ -2.02
CDH11P55287 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH11P55287 AC006026.2-201ENST00000457376 180 ntBASIC2.44□□□□□ -2.02
CDH11P55287 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH11P55287 Y_RNA.682-201ENST00000516457 100 ntBASIC2.44□□□□□ -2.02
CDH11P55287 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH11P55287 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH11P55287 AL355877.2-201ENST00000603670 358 ntBASIC2.44□□□□□ -2.02
CDH11P55287 AC019159.1-201ENST00000605094 187 ntBASIC2.44□□□□□ -2.02
CDH11P55287 uc_338.15-201ENST00000615470 191 ntBASIC2.44□□□□□ -2.02
CDH11P55287 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH11P55287 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
CDH11P55287 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDH11P55287 AC138915.1-201ENST00000565427 1685 ntBASIC2.44□□□□□ -2.02
CDH11P55287 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH11P55287 RBBP8P1-201ENST00000449447 1844 ntBASIC2.43□□□□□ -2.02
CDH11P55287 Y_RNA.70-201ENST00000362886 110 ntBASIC2.43□□□□□ -2.02
CDH11P55287 RNA5SP393-201ENST00000363423 117 ntBASIC2.43□□□□□ -2.02
CDH11P55287 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
CDH11P55287 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH11P55287 RNU6-1328P-201ENST00000410938 106 ntBASIC2.43□□□□□ -2.02
CDH11P55287 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
CDH11P55287 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.43□□□□□ -2.02
CDH11P55287 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.43□□□□□ -2.02
CDH11P55287 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH11P55287 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH11P55287 AC243964.1-201ENST00000441814 261 ntBASIC2.43□□□□□ -2.02
CDH11P55287 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH11P55287 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH11P55287 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH11P55287 RNU7-187P-201ENST00000458985 68 ntBASIC2.43□□□□□ -2.02
CDH11P55287 MTND5P5-201ENST00000503764 376 ntBASIC2.43□□□□□ -2.02
CDH11P55287 FGF7P4-201ENST00000509595 295 ntBASIC2.43□□□□□ -2.02
CDH11P55287 RNU5F-8P-201ENST00000515941 111 ntBASIC2.43□□□□□ -2.02
CDH11P55287 RN7SKP132-201ENST00000516001 208 ntBASIC2.43□□□□□ -2.02
CDH11P55287 SCARNA11.3-201ENST00000517276 130 ntBASIC2.43□□□□□ -2.02
CDH11P55287 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH11P55287 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.43□□□□□ -2.02
CDH11P55287 AL356575.1-201ENST00000603008 283 ntBASIC2.43□□□□□ -2.02
CDH11P55287 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH11P55287 RNU6-91P-201ENST00000607774 107 ntBASIC2.43□□□□□ -2.02
CDH11P55287 uc_338.5-201ENST00000611839 155 ntBASIC2.43□□□□□ -2.02
CDH11P55287 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH11P55287 AC244517.12-201ENST00000623581 663 ntBASIC2.43□□□□□ -2.02
CDH11P55287 TPTEP1-208ENST00000636884 213 ntBASIC2.43□□□□□ -2.02
CDH11P55287 MIR3529-201ENST00000637713 78 ntBASIC2.43□□□□□ -2.02
CDH11P55287 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH11P55287 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.42□□□□□ -2.02
CDH11P55287 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CDH11P55287 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH11P55287 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.42□□□□□ -2.02
CDH11P55287 MTND4P12-201ENST00000498999 1377 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC062016.1-201ENST00000355719 319 ntBASIC2.42□□□□□ -2.02
CDH11P55287 Y_RNA.142-201ENST00000363491 102 ntBASIC2.42□□□□□ -2.02
CDH11P55287 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
CDH11P55287 Y_RNA.474-201ENST00000384341 102 ntBASIC2.42□□□□□ -2.02
CDH11P55287 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH11P55287 AL513475.1-201ENST00000406602 315 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AL030996.1-201ENST00000411430 235 ntBASIC2.42□□□□□ -2.02
CDH11P55287 NUP35P1-201ENST00000422734 947 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
CDH11P55287 SNAP23P1-201ENST00000433229 246 ntBASIC2.42□□□□□ -2.02
CDH11P55287 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.42□□□□□ -2.02
CDH11P55287 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH11P55287 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
CDH11P55287 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
CDH11P55287 RNU6-1037P-201ENST00000459571 107 ntBASIC2.42□□□□□ -2.02
CDH11P55287 RPS29P27-201ENST00000463711 170 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC130509.1-201ENST00000464158 433 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC133134.1-201ENST00000466800 359 ntBASIC2.42□□□□□ -2.02
CDH11P55287 MTCO1P29-201ENST00000496868 288 ntBASIC2.42□□□□□ -2.02
CDH11P55287 GZMAP1-201ENST00000503054 631 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.42□□□□□ -2.02
CDH11P55287 AC096745.1-201ENST00000509945 370 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH11P55287 RNU6-273P-201ENST00000516937 96 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC105029.1-201ENST00000520250 669 ntBASIC2.42□□□□□ -2.02
CDH11P55287 CKS1BP7-201ENST00000522230 235 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms