Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC068587.5-201ENST00000528506 175 ntBASIC1.59□□□□□ -2.15
CDH6P55285 ZNF321P-202ENST00000550843 495 ntBASIC1.59□□□□□ -2.15
CDH6P55285 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH6P55285 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC010928.2-201ENST00000588017 287 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AC092354.1-201ENST00000606057 376 ntBASIC1.59□□□□□ -2.15
CDH6P55285 RMST_6.1-201ENST00000611980 203 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AC063943.3-201ENST00000615562 356 ntBASIC1.59□□□□□ -2.15
CDH6P55285 MIR7843-201ENST00000622274 79 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AL391262.2-201ENST00000622466 494 ntBASIC1.59□□□□□ -2.15
CDH6P55285 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CDH6P55285 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CDH6P55285 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH6P55285 U8.3-201ENST00000363321 132 ntBASIC1.58□□□□□ -2.16
CDH6P55285 RNY4P34-201ENST00000364779 95 ntBASIC1.58□□□□□ -2.16
CDH6P55285 Y_RNA.576-201ENST00000384781 102 ntBASIC1.58□□□□□ -2.16
CDH6P55285 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
CDH6P55285 SNORA67.5-201ENST00000391036 107 ntBASIC1.58□□□□□ -2.16
CDH6P55285 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
CDH6P55285 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.58□□□□□ -2.16
CDH6P55285 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AL122001.1-201ENST00000457027 370 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH6P55285 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH6P55285 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH6P55285 AP002453.2-201ENST00000533503 320 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH6P55285 MTND1P24-201ENST00000552175 861 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AC008015.1-201ENST00000555505 465 ntBASIC1.58□□□□□ -2.16
CDH6P55285 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH6P55285 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH6P55285 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
CDH6P55285 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AC073539.2-201ENST00000597113 165 ntBASIC1.58□□□□□ -2.16
CDH6P55285 BNIP3P8-201ENST00000597863 560 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AC138649.3-201ENST00000622154 254 ntBASIC1.58□□□□□ -2.16
CDH6P55285 AF246928.1-201ENST00000623768 87 ntBASIC1.58□□□□□ -2.16
CDH6P55285 MIR1248-201ENST00000629190 106 ntBASIC1.58□□□□□ -2.16
CDH6P55285 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH6P55285 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CDH6P55285 CBX3P1-201ENST00000325243 554 ntBASIC1.57□□□□□ -2.16
CDH6P55285 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-527P-201ENST00000363425 104 ntBASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-169P-201ENST00000365336 107 ntBASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-116P-201ENST00000384042 109 ntBASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-1222P-201ENST00000384615 107 ntBASIC1.57□□□□□ -2.16
CDH6P55285 MIR764-201ENST00000390811 85 ntBASIC1.57□□□□□ -2.16
CDH6P55285 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
CDH6P55285 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-195P-201ENST00000411352 109 ntBASIC1.57□□□□□ -2.16
CDH6P55285 Z99497.1-201ENST00000421282 135 ntBASIC1.57□□□□□ -2.16
CDH6P55285 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH6P55285 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH6P55285 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
CDH6P55285 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH6P55285 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.57□□□□□ -2.16
CDH6P55285 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-991P-201ENST00000516168 107 ntBASIC1.57□□□□□ -2.16
CDH6P55285 Vault.3-201ENST00000516676 95 ntBASIC1.57□□□□□ -2.16
CDH6P55285 RNU6-232P-201ENST00000517144 64 ntBASIC1.57□□□□□ -2.16
CDH6P55285 AC115990.1-201ENST00000526957 301 ntBASIC1.57□□□□□ -2.16
CDH6P55285 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.57□□□□□ -2.16
CDH6P55285 AP000654.2-201ENST00000605633 586 ntBASIC1.57□□□□□ -2.16
CDH6P55285 AC008250.2-201ENST00000615261 205 ntBASIC1.57□□□□□ -2.16
CDH6P55285 AC097372.5-201ENST00000623665 376 ntBASIC1.57□□□□□ -2.16
CDH6P55285 AC233981.2-201ENST00000611524 1614 ntBASIC1.57□□□□□ -2.16
CDH6P55285 MTND4P4-201ENST00000439033 1366 ntBASIC1.57□□□□□ -2.16
CDH6P55285 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH6P55285 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
CDH6P55285 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH6P55285 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH6P55285 SNORA62.1-201ENST00000364287 154 ntBASIC1.56□□□□□ -2.16
CDH6P55285 RNU6-160P-201ENST00000384591 107 ntBASIC1.56□□□□□ -2.16
CDH6P55285 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
CDH6P55285 RNU6-607P-201ENST00000411283 108 ntBASIC1.56□□□□□ -2.16
CDH6P55285 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.56□□□□□ -2.16
CDH6P55285 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CDH6P55285 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH6P55285 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.56□□□□□ -2.16
CDH6P55285 AC073614.1-201ENST00000438690 650 ntBASIC1.56□□□□□ -2.16
CDH6P55285 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.56□□□□□ -2.16
CDH6P55285 AL035666.1-201ENST00000446195 348 ntBASIC1.56□□□□□ -2.16
CDH6P55285 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH6P55285 AC104806.1-201ENST00000508720 308 ntBASIC1.56□□□□□ -2.16
CDH6P55285 AC009646.1-201ENST00000510455 318 ntBASIC1.56□□□□□ -2.16
CDH6P55285 Y_RNA.675-201ENST00000516389 149 ntBASIC1.56□□□□□ -2.16
CDH6P55285 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH6P55285 AC106038.2-201ENST00000520706 568 ntBASIC1.56□□□□□ -2.16
CDH6P55285 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH6P55285 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH6P55285 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
CDH6P55285 AC090578.1-201ENST00000604955 591 ntBASIC1.56□□□□□ -2.16
CDH6P55285 AC079248.2-201ENST00000623779 326 ntBASIC1.56□□□□□ -2.16
CDH6P55285 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
CDH6P55285 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms