Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MIR3921-201ENST00000577308 85 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC010928.2-201ENST00000588017 287 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.8□□□□□ -1.8
NCKAP1LP55160 MZT1P2-201ENST00000604387 248 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC011921.3-201ENST00000605540 361 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC073657.2-201ENST00000605661 303 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC097372.5-201ENST00000623665 376 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 SCARNA4-201ENST00000629045 128 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1LP55160 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1LP55160 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1LP55160 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1LP55160 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1LP55160 Y_RNA.44-201ENST00000362676 108 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RNU6-173P-201ENST00000364215 104 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 Y_RNA.245-201ENST00000364493 95 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RNU6-17P-201ENST00000384245 107 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RNU6-18P-201ENST00000384527 107 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 MIR490-201ENST00000384865 128 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 MIR34A-201ENST00000385130 110 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RNU2-20P-201ENST00000410425 191 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 TOMM20P4-201ENST00000427861 435 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 EIF1P2-201ENST00000428233 350 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 Z82188.1-201ENST00000436709 154 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 PIGFP3-201ENST00000441918 722 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RPS4XP2-201ENST00000458402 793 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RPS26P21-201ENST00000475397 348 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 SNORA31.19-201ENST00000517079 126 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC087441.2-201ENST00000529141 262 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC024405.2-202ENST00000532731 184 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 MIR4423-201ENST00000580922 80 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 MIR4282-201ENST00000583613 67 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC008739.3-201ENST00000603262 127 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC072026.1-201ENST00000605023 201 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 AC090132.2-201ENST00000615881 347 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 MIR6075-201ENST00000620782 95 ntBASIC3.79□□□□□ -1.8
NCKAP1LP55160 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.79□□□□□ -1.8
NCKAP1LP55160 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1LP55160 SNORD115-32-201ENST00000364079 82 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 RNA5SP167-201ENST00000365461 116 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 SNORD50.2-201ENST00000365465 70 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 MIR183-201ENST00000384958 110 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 MIR670-201ENST00000390142 98 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 AC244098.2-201ENST00000422068 99 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 NDUFB4P10-201ENST00000452541 359 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 AC092798.1-201ENST00000458542 409 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 RPL7P47-201ENST00000497299 556 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 RNU6-861P-201ENST00000516745 106 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 SNORA31.18-201ENST00000517043 134 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 IGKV2-26-201ENST00000518305 343 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 MIR4782-201ENST00000577987 79 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 AL590240.4-201ENST00000616908 390 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.78□□□□□ -1.8
NCKAP1LP55160 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKAP1LP55160 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1LP55160 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NCKAP1LP55160 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NCKAP1LP55160 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NCKAP1LP55160 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NCKAP1LP55160 Y_RNA.122-201ENST00000363331 96 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 Y_RNA.170-201ENST00000363746 110 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 RNU6-318P-201ENST00000384283 103 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 RNA5SP171-201ENST00000391071 115 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 AL033519.2-201ENST00000403958 392 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 AC093578.1-201ENST00000415219 368 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 AC008155.2-201ENST00000464337 397 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 AC139453.3-201ENST00000493276 369 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 HMGB1P22-201ENST00000505315 124 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 AC074198.2-201ENST00000508153 258 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 SNORA70.19-201ENST00000516717 90 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.77□□□□□ -1.81
NCKAP1LP55160 RNVU1-4-201ENST00000612985 164 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 AC011476.5-201ENST00000615594 130 ntBASIC3.77□□□□□ -1.81
NCKAP1LP55160 U6.105-201ENST00000637379 88 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms