Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGCS2P54868 LINC00933-203ENST00000559812 219 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGCS2P54868 MIR4782-201ENST00000577987 79 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGCS2P54868 AP003465.2-201ENST00000602571 373 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 HMGB1P24-202ENST00000615653 685 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 RMST_4.1-201ENST00000616886 107 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AP003400.5-201ENST00000624827 617 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGCS2P54868 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGCS2P54868 AC004520.1-201ENST00000608362 1413 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 CDC27P3-201ENST00000635418 1910 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGCS2P54868 AC027514.1-201ENST00000588561 1603 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGCS2P54868 RNU6-898P-201ENST00000365627 104 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 Y_RNA.399-201ENST00000383955 105 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 RNU6-393P-201ENST00000384475 107 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 MIR524-201ENST00000385242 87 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 FCF1P9-201ENST00000412546 282 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 RPL23AP36-201ENST00000413895 458 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AC016831.2-201ENST00000417179 352 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 MTCO1P20-201ENST00000425366 358 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AL627311.1-201ENST00000431514 115 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 CR769767.1-201ENST00000436337 346 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 UBE2V1P8-201ENST00000437166 265 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGCS2P54868 LRRC34P2-201ENST00000514850 553 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 MTND1P5-201ENST00000517906 940 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGCS2P54868 BNIP3P6-201ENST00000549284 499 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AL118558.2-201ENST00000556294 238 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGCS2P54868 AC092325.1-201ENST00000566449 554 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 MIR5692A1-201ENST00000580523 69 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AC023043.2-201ENST00000589678 1026 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AL162413.1-201ENST00000603198 110 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 uc_338.34-201ENST00000617467 174 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 FER-210ENST00000628534 558 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGCS2P54868 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HMGCS2P54868 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGCS2P54868 AC080128.1-201ENST00000474389 1917 ntBASIC2.21□□□□□ -2.06
HMGCS2P54868 Y_RNA.9-201ENST00000362354 101 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 RNU6-451P-201ENST00000362921 107 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 RNU4-12P-201ENST00000365233 139 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 Y_RNA.402-201ENST00000383972 102 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 MIR9-3-201ENST00000385084 90 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 SNORD115-47-201ENST00000391226 86 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 EIF1AXP1-201ENST00000419267 435 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGCS2P54868 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AL139109.1-201ENST00000455491 297 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AC073901.1-201ENST00000462471 408 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AC023141.11-201ENST00000508864 202 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HMGCS2P54868 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGCS2P54868 RNU6-718P-201ENST00000516166 105 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 RNU6-581P-201ENST00000516214 105 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AC136619.2-201ENST00000563361 631 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AC007151.1-201ENST00000572774 483 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 MIR4498-201ENST00000577599 66 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC009314.1-201ENST00000603871 304 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC091152.3-201ENST00000604227 325 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 U6.42-201ENST00000618440 107 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGCS2P54868 AC022418.1-201ENST00000624118 445 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGCS2P54868 MIR7157-201ENST00000635801 60 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 MIR3199-2-201ENST00000636243 86 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 MIR3688-2-201ENST00000636963 87 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGCS2P54868 ZNF720P1-201ENST00000562403 1939 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 AC010889.1-201ENST00000566193 2666 ntBASIC2.2□□□□□ -2.06
HMGCS2P54868 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HMGCS2P54868 Y_RNA.167-201ENST00000363735 109 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 RNY3P3-201ENST00000363816 102 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 Y_RNA.256-201ENST00000364594 104 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 RNA5SP190-201ENST00000365222 118 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 RNU6-434P-201ENST00000384376 107 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MIR514A2-201ENST00000385131 88 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MIR514A3-201ENST00000385132 88 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HMGCS2P54868 AL606923.1-201ENST00000406616 190 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGCS2P54868 Z82209.1-201ENST00000422141 2135 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGCS2P54868 SEPT14P3-201ENST00000439401 183 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms