Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ACLYP53396 RNU6-965P-201ENST00000516721 96 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AC022616.3-201ENST00000523940 148 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AC022878.1-201ENST00000530684 149 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.66□□□□□ -2.14
ACLYP53396 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.66□□□□□ -2.14
ACLYP53396 MIR3908-201ENST00000579798 126 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AC078795.2-201ENST00000602835 1252 ntBASIC1.66□□□□□ -2.14
ACLYP53396 RMST_4.1-201ENST00000616886 107 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AL159153.1-201ENST00000619688 317 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AC068787.1-201ENST00000623908 691 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AL359740.1-201ENST00000624340 592 ntBASIC1.66□□□□□ -2.14
ACLYP53396 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.65□□□□□ -2.15
ACLYP53396 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
ACLYP53396 snoU2_19.1-201ENST00000362361 80 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RNU6-78P-201ENST00000362897 107 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RNU6-371P-201ENST00000364283 108 ntBASIC1.65□□□□□ -2.15
ACLYP53396 Y_RNA.466-201ENST00000384294 113 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RNY1P14-201ENST00000384426 108 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RNU2-8P-201ENST00000410727 190 ntBASIC1.65□□□□□ -2.15
ACLYP53396 BTF3L4P1-201ENST00000413813 468 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RPL21P90-201ENST00000415692 466 ntBASIC1.65□□□□□ -2.15
ACLYP53396 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.65□□□□□ -2.15
ACLYP53396 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.65□□□□□ -2.15
ACLYP53396 AC244505.5-201ENST00000443639 207 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RPL30P12-201ENST00000474666 353 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RNU6-685P-201ENST00000517088 95 ntBASIC1.65□□□□□ -2.15
ACLYP53396 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.65□□□□□ -2.15
ACLYP53396 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.65□□□□□ -2.15
ACLYP53396 RPL21P5-201ENST00000554662 472 ntBASIC1.65□□□□□ -2.15
ACLYP53396 AC022254.1-201ENST00000567857 235 ntBASIC1.65□□□□□ -2.15
ACLYP53396 MIR5692A1-201ENST00000580523 69 ntBASIC1.65□□□□□ -2.15
ACLYP53396 MIR4452-201ENST00000583004 71 ntBASIC1.65□□□□□ -2.15
ACLYP53396 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.65□□□□□ -2.15
ACLYP53396 AC027449.1-201ENST00000608890 407 ntBASIC1.65□□□□□ -2.15
ACLYP53396 AC004223.4-201ENST00000612426 332 ntBASIC1.65□□□□□ -2.15
ACLYP53396 RMST_7.1-201ENST00000621935 268 ntBASIC1.65□□□□□ -2.15
ACLYP53396 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
ACLYP53396 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.64□□□□□ -2.15
ACLYP53396 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ACLYP53396 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ACLYP53396 RNU6-179P-201ENST00000363350 107 ntBASIC1.64□□□□□ -2.15
ACLYP53396 RNY1P12-201ENST00000364251 105 ntBASIC1.64□□□□□ -2.15
ACLYP53396 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
ACLYP53396 MIR597-201ENST00000384968 97 ntBASIC1.64□□□□□ -2.15
ACLYP53396 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ACLYP53396 RNU11-3P-201ENST00000391111 133 ntBASIC1.64□□□□□ -2.15
ACLYP53396 BTF3L4P2-201ENST00000392798 346 ntBASIC1.64□□□□□ -2.15
ACLYP53396 RNU6-387P-201ENST00000411331 105 ntBASIC1.64□□□□□ -2.15
ACLYP53396 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.64□□□□□ -2.15
ACLYP53396 C1DP2-201ENST00000418167 426 ntBASIC1.64□□□□□ -2.15
ACLYP53396 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
ACLYP53396 AL593851.1-201ENST00000426171 157 ntBASIC1.64□□□□□ -2.15
ACLYP53396 RPL30P1-201ENST00000488676 339 ntBASIC1.64□□□□□ -2.15
ACLYP53396 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
ACLYP53396 SNORA3.4-201ENST00000515969 96 ntBASIC1.64□□□□□ -2.15
ACLYP53396 AP005660.1-201ENST00000522972 293 ntBASIC1.64□□□□□ -2.15
ACLYP53396 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.64□□□□□ -2.15
ACLYP53396 MIR4713-201ENST00000582691 75 ntBASIC1.64□□□□□ -2.15
ACLYP53396 AC091135.1-201ENST00000585943 307 ntBASIC1.64□□□□□ -2.15
ACLYP53396 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ACLYP53396 AC011458.1-201ENST00000604034 617 ntBASIC1.64□□□□□ -2.15
ACLYP53396 AL136363.2-201ENST00000604173 851 ntBASIC1.64□□□□□ -2.15
ACLYP53396 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ACLYP53396 RNU6-1164P-201ENST00000364428 107 ntBASIC1.63□□□□□ -2.15
ACLYP53396 RNU6-234P-201ENST00000365229 104 ntBASIC1.63□□□□□ -2.15
ACLYP53396 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
ACLYP53396 SNORA20.2-201ENST00000383922 131 ntBASIC1.63□□□□□ -2.15
ACLYP53396 UBE2V1P4-201ENST00000425374 344 ntBASIC1.63□□□□□ -2.15
ACLYP53396 CALM2P2-201ENST00000428512 440 ntBASIC1.63□□□□□ -2.15
ACLYP53396 RPS15AP10-201ENST00000432472 382 ntBASIC1.63□□□□□ -2.15
ACLYP53396 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.63□□□□□ -2.15
ACLYP53396 ATP5EP1-201ENST00000510257 156 ntBASIC1.63□□□□□ -2.15
ACLYP53396 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.63□□□□□ -2.15
ACLYP53396 RNU6-1220P-201ENST00000517126 108 ntBASIC1.63□□□□□ -2.15
ACLYP53396 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.63□□□□□ -2.15
ACLYP53396 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.63□□□□□ -2.15
ACLYP53396 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.63□□□□□ -2.15
ACLYP53396 AL121992.2-201ENST00000606262 256 ntBASIC1.63□□□□□ -2.15
ACLYP53396 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.63□□□□□ -2.15
ACLYP53396 AC091895.1-201ENST00000624494 256 ntBASIC1.63□□□□□ -2.15
ACLYP53396 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.63□□□□□ -2.15
ACLYP53396 RNU1-58P-201ENST00000362413 163 ntBASIC1.62□□□□□ -2.15
ACLYP53396 RNU6-743P-201ENST00000364151 106 ntBASIC1.62□□□□□ -2.15
ACLYP53396 RNU5E-7P-201ENST00000365290 117 ntBASIC1.62□□□□□ -2.15
ACLYP53396 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.62□□□□□ -2.15
ACLYP53396 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.62□□□□□ -2.15
ACLYP53396 AC000111.3-201ENST00000433478 193 ntBASIC1.62□□□□□ -2.15
ACLYP53396 IFNA20P-201ENST00000436840 528 ntBASIC1.62□□□□□ -2.15
ACLYP53396 HSPE1P21-201ENST00000438283 308 ntBASIC1.62□□□□□ -2.15
ACLYP53396 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.62□□□□□ -2.15
ACLYP53396 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.62□□□□□ -2.15
ACLYP53396 RNA5SP57-201ENST00000459463 123 ntBASIC1.62□□□□□ -2.15
ACLYP53396 AC116562.3-201ENST00000506136 177 ntBASIC1.62□□□□□ -2.15
ACLYP53396 MTCYBP40-201ENST00000509390 1135 ntBASIC1.62□□□□□ -2.15
ACLYP53396 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.62□□□□□ -2.15
ACLYP53396 SCARNA24.1-201ENST00000516465 137 ntBASIC1.62□□□□□ -2.15
ACLYP53396 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.62□□□□□ -2.15
ACLYP53396 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms