Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.24□□□□□ -1.73
USP11P51784 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.24□□□□□ -1.73
USP11P51784 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP11P51784 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP11P51784 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP11P51784 OTUD4P1-201ENST00000237841 3067 ntBASIC4.23□□□□□ -1.73
USP11P51784 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP11P51784 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 MIR410-201ENST00000362222 80 ntBASIC4.23□□□□□ -1.73
USP11P51784 RNU6-626P-201ENST00000363354 107 ntBASIC4.23□□□□□ -1.73
USP11P51784 RNU6-961P-201ENST00000363893 105 ntBASIC4.23□□□□□ -1.73
USP11P51784 Y_RNA.308-201ENST00000365043 101 ntBASIC4.23□□□□□ -1.73
USP11P51784 RNU6-1286P-201ENST00000383871 107 ntBASIC4.23□□□□□ -1.73
USP11P51784 RNU6-21P-201ENST00000384710 107 ntBASIC4.23□□□□□ -1.73
USP11P51784 Y_RNA.570-201ENST00000384750 101 ntBASIC4.23□□□□□ -1.73
USP11P51784 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USP11P51784 HMGN2P8-201ENST00000391458 268 ntBASIC4.23□□□□□ -1.73
USP11P51784 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP11P51784 RNU5E-9P-201ENST00000411164 104 ntBASIC4.23□□□□□ -1.73
USP11P51784 RAB9AP3-201ENST00000412737 573 ntBASIC4.23□□□□□ -1.73
USP11P51784 RPL23AP36-201ENST00000413895 458 ntBASIC4.23□□□□□ -1.73
USP11P51784 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP11P51784 AC096638.1-201ENST00000444678 216 ntBASIC4.23□□□□□ -1.73
USP11P51784 RAB9AP1-201ENST00000449393 573 ntBASIC4.23□□□□□ -1.73
USP11P51784 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.23□□□□□ -1.73
USP11P51784 AL049830.2-201ENST00000480072 201 ntBASIC4.23□□□□□ -1.73
USP11P51784 AC091874.1-201ENST00000511402 339 ntBASIC4.23□□□□□ -1.73
USP11P51784 RNU6-1114P-201ENST00000516022 107 ntBASIC4.23□□□□□ -1.73
USP11P51784 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.23□□□□□ -1.73
USP11P51784 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.23□□□□□ -1.73
USP11P51784 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.23□□□□□ -1.73
USP11P51784 MIR4444-1-201ENST00000581696 74 ntBASIC4.23□□□□□ -1.73
USP11P51784 MIR4444-2-201ENST00000584390 74 ntBASIC4.23□□□□□ -1.73
USP11P51784 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.23□□□□□ -1.73
USP11P51784 AL121772.2-201ENST00000614331 297 ntBASIC4.23□□□□□ -1.73
USP11P51784 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP11P51784 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 AC010733.2-201ENST00000589496 5702 ntBASIC4.23□□□□□ -1.73
USP11P51784 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.23□□□□□ -1.73
USP11P51784 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
USP11P51784 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP11P51784 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.22□□□□□ -1.73
USP11P51784 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP11P51784 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.22□□□□□ -1.73
USP11P51784 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.22□□□□□ -1.73
USP11P51784 MIR423-201ENST00000362201 94 ntBASIC4.22□□□□□ -1.73
USP11P51784 RNU6-1130P-201ENST00000365434 107 ntBASIC4.22□□□□□ -1.73
USP11P51784 RNU6-20P-201ENST00000384106 107 ntBASIC4.22□□□□□ -1.73
USP11P51784 PTMAP2-201ENST00000397627 327 ntBASIC4.22□□□□□ -1.73
USP11P51784 AC009237.7-201ENST00000447357 229 ntBASIC4.22□□□□□ -1.73
USP11P51784 MRPS10P1-201ENST00000448483 130 ntBASIC4.22□□□□□ -1.73
USP11P51784 RPL23AP3-201ENST00000453844 468 ntBASIC4.22□□□□□ -1.73
USP11P51784 RN7SL93P-201ENST00000463035 293 ntBASIC4.22□□□□□ -1.73
USP11P51784 KC877373.1-201ENST00000479066 408 ntBASIC4.22□□□□□ -1.73
USP11P51784 RN7SKP49-201ENST00000516675 260 ntBASIC4.22□□□□□ -1.73
USP11P51784 RNU6-567P-201ENST00000516746 107 ntBASIC4.22□□□□□ -1.73
USP11P51784 MED28P6-201ENST00000558776 231 ntBASIC4.22□□□□□ -1.73
USP11P51784 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.22□□□□□ -1.73
USP11P51784 IGHVIII-44-202ENST00000636235 289 ntBASIC4.22□□□□□ -1.73
USP11P51784 RBBP8P1-201ENST00000449447 1844 ntBASIC4.22□□□□□ -1.73
USP11P51784 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP11P51784 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
USP11P51784 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
USP11P51784 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
USP11P51784 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP11P51784 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP11P51784 Y_RNA.136-201ENST00000363444 102 ntBASIC4.21□□□□□ -1.74
USP11P51784 RNU6-281P-201ENST00000384212 103 ntBASIC4.21□□□□□ -1.74
USP11P51784 RNU6-959P-201ENST00000384671 107 ntBASIC4.21□□□□□ -1.74
USP11P51784 MIR487A-201ENST00000385009 80 ntBASIC4.21□□□□□ -1.74
USP11P51784 MIR10B-201ENST00000385011 110 ntBASIC4.21□□□□□ -1.74
USP11P51784 MIR153-2-201ENST00000385225 87 ntBASIC4.21□□□□□ -1.74
USP11P51784 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USP11P51784 UBA52P6-201ENST00000399822 382 ntBASIC4.21□□□□□ -1.74
USP11P51784 RNA5SP31-201ENST00000411144 127 ntBASIC4.21□□□□□ -1.74
USP11P51784 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.21□□□□□ -1.74
USP11P51784 UQCRBP2-201ENST00000447827 297 ntBASIC4.21□□□□□ -1.74
USP11P51784 RPL23AP49-201ENST00000492925 468 ntBASIC4.21□□□□□ -1.74
USP11P51784 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.21□□□□□ -1.74
USP11P51784 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.21□□□□□ -1.74
USP11P51784 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP11P51784 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.21□□□□□ -1.74
USP11P51784 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP11P51784 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP11P51784 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP11P51784 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP11P51784 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
USP11P51784 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP11P51784 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
USP11P51784 RNU1-18P-201ENST00000363062 164 ntBASIC4.2□□□□□ -1.74
USP11P51784 OOSP1P1-201ENST00000423265 274 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC098614.2-201ENST00000426040 255 ntBASIC4.2□□□□□ -1.74
USP11P51784 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.2□□□□□ -1.74
USP11P51784 AC243964.1-201ENST00000441814 261 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.2□□□□□ -1.74
USP11P51784 HMGN2P7-201ENST00000456186 273 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms