Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RPS24P13-201ENST00000442520 397 ntBASIC2.59□□□□□ -1.99
CLK1P49759 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK1P49759 RNU6-953P-201ENST00000459154 107 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AC018437.1-201ENST00000492214 406 ntBASIC2.59□□□□□ -1.99
CLK1P49759 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.59□□□□□ -1.99
CLK1P49759 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK1P49759 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.59□□□□□ -1.99
CLK1P49759 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
CLK1P49759 RNU6-914P-201ENST00000516749 109 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AP000889.2-201ENST00000532684 490 ntBASIC2.59□□□□□ -1.99
CLK1P49759 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK1P49759 AC022080.3-201ENST00000544433 482 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.59□□□□□ -1.99
CLK1P49759 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLK1P49759 MIR3672-201ENST00000584290 82 ntBASIC2.59□□□□□ -1.99
CLK1P49759 POLR3GP2-201ENST00000588366 668 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AC007229.1-201ENST00000590455 412 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AC113139.1-201ENST00000605049 239 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AL160413.1-201ENST00000622780 310 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AC090574.1-201ENST00000623186 233 ntBASIC2.59□□□□□ -1.99
CLK1P49759 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.59□□□□□ -1.99
CLK1P49759 ZNF658B-202ENST00000615961 3375 ntBASIC2.59□□□□□ -2
CLK1P49759 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLK1P49759 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.58□□□□□ -2
CLK1P49759 RNU6-1252P-201ENST00000363054 104 ntBASIC2.58□□□□□ -2
CLK1P49759 Y_RNA.135-201ENST00000363439 95 ntBASIC2.58□□□□□ -2
CLK1P49759 SNORD113-7-201ENST00000363762 77 ntBASIC2.58□□□□□ -2
CLK1P49759 RNA5SP387-201ENST00000364226 106 ntBASIC2.58□□□□□ -2
CLK1P49759 RNU6-371P-201ENST00000364283 108 ntBASIC2.58□□□□□ -2
CLK1P49759 RNU6-393P-201ENST00000384475 107 ntBASIC2.58□□□□□ -2
CLK1P49759 MIR548K-201ENST00000408406 116 ntBASIC2.58□□□□□ -2
CLK1P49759 RNU4-14P-201ENST00000410858 122 ntBASIC2.58□□□□□ -2
CLK1P49759 EEF1A1P41-201ENST00000414667 207 ntBASIC2.58□□□□□ -2
CLK1P49759 RPLP0P7-201ENST00000416050 667 ntBASIC2.58□□□□□ -2
CLK1P49759 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.58□□□□□ -2
CLK1P49759 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.58□□□□□ -2
CLK1P49759 CR769767.1-201ENST00000436337 346 ntBASIC2.58□□□□□ -2
CLK1P49759 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.58□□□□□ -2
CLK1P49759 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.58□□□□□ -2
CLK1P49759 RNU7-167P-201ENST00000459160 62 ntBASIC2.58□□□□□ -2
CLK1P49759 Y_RNA.632-201ENST00000459189 102 ntBASIC2.58□□□□□ -2
CLK1P49759 AC087884.1-201ENST00000469738 328 ntBASIC2.58□□□□□ -2
CLK1P49759 AC068781.1-201ENST00000488231 618 ntBASIC2.58□□□□□ -2
CLK1P49759 HIGD1AP13-201ENST00000509878 289 ntBASIC2.58□□□□□ -2
CLK1P49759 RNU6-1183P-201ENST00000517054 60 ntBASIC2.58□□□□□ -2
CLK1P49759 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.58□□□□□ -2
CLK1P49759 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.58□□□□□ -2
CLK1P49759 AL355297.2-201ENST00000604792 129 ntBASIC2.58□□□□□ -2
CLK1P49759 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.58□□□□□ -2
CLK1P49759 uc_338.15-201ENST00000615470 191 ntBASIC2.58□□□□□ -2
CLK1P49759 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLK1P49759 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLK1P49759 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLK1P49759 MIR26A1-201ENST00000362205 77 ntBASIC2.57□□□□□ -2
CLK1P49759 Y_RNA.212-201ENST00000364177 102 ntBASIC2.57□□□□□ -2
CLK1P49759 RNU6-1280P-201ENST00000365211 107 ntBASIC2.57□□□□□ -2
CLK1P49759 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
CLK1P49759 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.57□□□□□ -2
CLK1P49759 RNA5SP111-201ENST00000411386 101 ntBASIC2.57□□□□□ -2
CLK1P49759 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 VN1R36P-201ENST00000414936 291 ntBASIC2.57□□□□□ -2
CLK1P49759 AF228730.4-201ENST00000421457 183 ntBASIC2.57□□□□□ -2
CLK1P49759 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 BRK1P2-201ENST00000442875 223 ntBASIC2.57□□□□□ -2
CLK1P49759 AL360271.2-201ENST00000447710 161 ntBASIC2.57□□□□□ -2
CLK1P49759 SNORD19B-201ENST00000459623 84 ntBASIC2.57□□□□□ -2
CLK1P49759 AC117503.1-201ENST00000472241 394 ntBASIC2.57□□□□□ -2
CLK1P49759 MTCO1P29-201ENST00000496868 288 ntBASIC2.57□□□□□ -2
CLK1P49759 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.57□□□□□ -2
CLK1P49759 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 RNU6-1069P-201ENST00000516612 133 ntBASIC2.57□□□□□ -2
CLK1P49759 RNU6-256P-201ENST00000516747 97 ntBASIC2.57□□□□□ -2
CLK1P49759 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 AP000763.2-201ENST00000540641 163 ntBASIC2.57□□□□□ -2
CLK1P49759 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.57□□□□□ -2
CLK1P49759 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.57□□□□□ -2
CLK1P49759 MIR5692C1-201ENST00000585309 91 ntBASIC2.57□□□□□ -2
CLK1P49759 AC023043.2-201ENST00000589678 1026 ntBASIC2.57□□□□□ -2
CLK1P49759 AC073539.2-201ENST00000597113 165 ntBASIC2.57□□□□□ -2
CLK1P49759 AC007938.3-201ENST00000604965 623 ntBASIC2.57□□□□□ -2
CLK1P49759 AC022418.1-201ENST00000624118 445 ntBASIC2.57□□□□□ -2
CLK1P49759 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CLK1P49759 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLK1P49759 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.57□□□□□ -2
CLK1P49759 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
CLK1P49759 RNU6-1303P-201ENST00000364841 107 ntBASIC2.56□□□□□ -2
CLK1P49759 RNU6-434P-201ENST00000384376 107 ntBASIC2.56□□□□□ -2
CLK1P49759 RNU1-148P-201ENST00000384472 162 ntBASIC2.56□□□□□ -2
CLK1P49759 SNORA44-201ENST00000384584 132 ntBASIC2.56□□□□□ -2
CLK1P49759 MIR578-201ENST00000384828 96 ntBASIC2.56□□□□□ -2
CLK1P49759 MIR548F5-201ENST00000408421 86 ntBASIC2.56□□□□□ -2
CLK1P49759 AL592045.1-201ENST00000429867 352 ntBASIC2.56□□□□□ -2
CLK1P49759 MTCYBP6-201ENST00000441810 138 ntBASIC2.56□□□□□ -2
CLK1P49759 GPM6BP3-201ENST00000442797 145 ntBASIC2.56□□□□□ -2
CLK1P49759 MTND1P17-201ENST00000448961 204 ntBASIC2.56□□□□□ -2
CLK1P49759 TRBVA-201ENST00000498804 316 ntBASIC2.56□□□□□ -2
CLK1P49759 AC104136.1-201ENST00000512969 394 ntBASIC2.56□□□□□ -2
CLK1P49759 SNORA14.1-201ENST00000516113 141 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms