Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CASP4P49662 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CASP4P49662 RNU6-527P-201ENST00000363425 104 ntBASIC1.79□□□□□ -2.12
CASP4P49662 RNA5SP465-201ENST00000391195 109 ntBASIC1.79□□□□□ -2.12
CASP4P49662 RNU2-3P-201ENST00000410144 191 ntBASIC1.79□□□□□ -2.12
CASP4P49662 RNU6-1245P-201ENST00000411130 106 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AL591806.2-201ENST00000433122 173 ntBASIC1.79□□□□□ -2.12
CASP4P49662 MTND2P29-201ENST00000438595 412 ntBASIC1.79□□□□□ -2.12
CASP4P49662 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.79□□□□□ -2.12
CASP4P49662 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
CASP4P49662 AC022364.2-201ENST00000457963 554 ntBASIC1.79□□□□□ -2.12
CASP4P49662 MTND3P7-201ENST00000474435 343 ntBASIC1.79□□□□□ -2.12
CASP4P49662 RPL30P12-201ENST00000474666 353 ntBASIC1.79□□□□□ -2.12
CASP4P49662 RPL30P1-201ENST00000488676 339 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.79□□□□□ -2.12
CASP4P49662 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.79□□□□□ -2.12
CASP4P49662 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
CASP4P49662 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.79□□□□□ -2.12
CASP4P49662 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.79□□□□□ -2.12
CASP4P49662 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.79□□□□□ -2.12
CASP4P49662 AC115990.1-201ENST00000526957 301 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
CASP4P49662 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.79□□□□□ -2.12
CASP4P49662 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.79□□□□□ -2.12
CASP4P49662 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CASP4P49662 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.79□□□□□ -2.12
CASP4P49662 MIR4775-201ENST00000581168 75 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
CASP4P49662 CLIC4P2-201ENST00000601934 717 ntBASIC1.79□□□□□ -2.12
CASP4P49662 SEPT7P9-203ENST00000604116 343 ntBASIC1.79□□□□□ -2.12
CASP4P49662 Z82243.1-201ENST00000609432 473 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AC068944.2-201ENST00000610373 403 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AL159153.1-201ENST00000619688 317 ntBASIC1.79□□□□□ -2.12
CASP4P49662 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.79□□□□□ -2.12
CASP4P49662 AL356432.1-201ENST00000405809 419 ntBASIC1.78□□□□□ -2.12
CASP4P49662 RNU4-46P-201ENST00000410818 138 ntBASIC1.78□□□□□ -2.12
CASP4P49662 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AC096920.1-201ENST00000423991 241 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AC133104.1-201ENST00000429100 218 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AL596276.1-201ENST00000434465 418 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.78□□□□□ -2.12
CASP4P49662 RPL39P29-201ENST00000447779 157 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AL162395.1-201ENST00000457882 422 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.78□□□□□ -2.12
CASP4P49662 MTCO3P28-201ENST00000513351 515 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.78□□□□□ -2.12
CASP4P49662 RNA5SP503-201ENST00000517047 117 ntBASIC1.78□□□□□ -2.12
CASP4P49662 DUXAP5-201ENST00000529668 529 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.78□□□□□ -2.12
CASP4P49662 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.78□□□□□ -2.12
CASP4P49662 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.78□□□□□ -2.12
CASP4P49662 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
CASP4P49662 Z69720.2-201ENST00000624755 279 ntBASIC1.78□□□□□ -2.12
CASP4P49662 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.78□□□□□ -2.12
CASP4P49662 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CASP4P49662 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
CASP4P49662 U3.4-201ENST00000363352 213 ntBASIC1.77□□□□□ -2.13
CASP4P49662 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
CASP4P49662 RNU4-48P-201ENST00000365559 182 ntBASIC1.77□□□□□ -2.13
CASP4P49662 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CASP4P49662 SNORD14D-201ENST00000384390 87 ntBASIC1.77□□□□□ -2.13
CASP4P49662 RNU6-1222P-201ENST00000384615 107 ntBASIC1.77□□□□□ -2.13
CASP4P49662 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CASP4P49662 RNU2-48P-201ENST00000410694 191 ntBASIC1.77□□□□□ -2.13
CASP4P49662 RN7SKP101-201ENST00000411376 320 ntBASIC1.77□□□□□ -2.13
CASP4P49662 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.77□□□□□ -2.13
CASP4P49662 CYCSP33-201ENST00000414485 327 ntBASIC1.77□□□□□ -2.13
CASP4P49662 PIGFP2-201ENST00000421400 651 ntBASIC1.77□□□□□ -2.13
CASP4P49662 CBX3P6-201ENST00000430257 527 ntBASIC1.77□□□□□ -2.13
CASP4P49662 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.77□□□□□ -2.13
CASP4P49662 FDX1P2-201ENST00000450769 375 ntBASIC1.77□□□□□ -2.13
CASP4P49662 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.77□□□□□ -2.13
CASP4P49662 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
CASP4P49662 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.77□□□□□ -2.13
CASP4P49662 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.77□□□□□ -2.13
CASP4P49662 AC079140.5-201ENST00000507882 310 ntBASIC1.77□□□□□ -2.13
CASP4P49662 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CASP4P49662 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.77□□□□□ -2.13
CASP4P49662 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.77□□□□□ -2.13
CASP4P49662 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.77□□□□□ -2.13
CASP4P49662 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.77□□□□□ -2.13
CASP4P49662 AC008945.2-201ENST00000606056 604 ntBASIC1.77□□□□□ -2.13
CASP4P49662 AL132822.1-201ENST00000617063 513 ntBASIC1.77□□□□□ -2.13
CASP4P49662 AC120349.3-201ENST00000624377 529 ntBASIC1.77□□□□□ -2.13
CASP4P49662 U4.7-201ENST00000638126 106 ntBASIC1.77□□□□□ -2.13
CASP4P49662 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.76□□□□□ -2.13
CASP4P49662 snoU2_19.1-201ENST00000362361 80 ntBASIC1.76□□□□□ -2.13
CASP4P49662 Y_RNA.201-201ENST00000364052 96 ntBASIC1.76□□□□□ -2.13
CASP4P49662 RNU6-715P-201ENST00000365204 103 ntBASIC1.76□□□□□ -2.13
CASP4P49662 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
CASP4P49662 MIR1-2-201ENST00000384961 85 ntBASIC1.76□□□□□ -2.13
CASP4P49662 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.76□□□□□ -2.13
CASP4P49662 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.76□□□□□ -2.13
CASP4P49662 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.76□□□□□ -2.13
CASP4P49662 RPS15AP10-201ENST00000432472 382 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC007969.2-201ENST00000441891 191 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.76□□□□□ -2.13
CASP4P49662 AC244505.5-201ENST00000443639 207 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms