Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LHX1P48742 RNU6-105P-201ENST00000363909 104 ntBASIC2.41□□□□□ -2.02
LHX1P48742 Y_RNA.573-201ENST00000384763 105 ntBASIC2.41□□□□□ -2.02
LHX1P48742 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LHX1P48742 SNORD115-47-201ENST00000391226 86 ntBASIC2.41□□□□□ -2.02
LHX1P48742 FCF1P9-201ENST00000412546 282 ntBASIC2.41□□□□□ -2.02
LHX1P48742 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.41□□□□□ -2.02
LHX1P48742 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.41□□□□□ -2.02
LHX1P48742 RNU7-138P-201ENST00000459479 64 ntBASIC2.41□□□□□ -2.02
LHX1P48742 AC117503.1-201ENST00000472241 394 ntBASIC2.41□□□□□ -2.02
LHX1P48742 MTND1P5-201ENST00000517906 940 ntBASIC2.41□□□□□ -2.02
LHX1P48742 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.41□□□□□ -2.02
LHX1P48742 AC078814.3-201ENST00000553036 491 ntBASIC2.41□□□□□ -2.02
LHX1P48742 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.41□□□□□ -2.02
LHX1P48742 MIR1273D-201ENST00000577266 86 ntBASIC2.41□□□□□ -2.02
LHX1P48742 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.41□□□□□ -2.02
LHX1P48742 AL449363.1-201ENST00000617815 186 ntBASIC2.41□□□□□ -2.02
LHX1P48742 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.41□□□□□ -2.02
LHX1P48742 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.41□□□□□ -2.02
LHX1P48742 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LHX1P48742 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.41□□□□□ -2.02
LHX1P48742 MTND5P6-201ENST00000422338 1798 ntBASIC2.41□□□□□ -2.02
LHX1P48742 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.4□□□□□ -2.02
LHX1P48742 RNU6-877P-201ENST00000383868 107 ntBASIC2.4□□□□□ -2.03
LHX1P48742 Y_RNA.453-201ENST00000384223 109 ntBASIC2.4□□□□□ -2.03
LHX1P48742 RNU1-57P-201ENST00000384491 166 ntBASIC2.4□□□□□ -2.03
LHX1P48742 RNU6-1245P-201ENST00000411130 106 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.4□□□□□ -2.03
LHX1P48742 DPH3P2-201ENST00000422618 250 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.4□□□□□ -2.03
LHX1P48742 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.4□□□□□ -2.03
LHX1P48742 UBE2V1P8-201ENST00000437166 265 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AL353705.4-201ENST00000449661 238 ntBASIC2.4□□□□□ -2.03
LHX1P48742 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
LHX1P48742 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.4□□□□□ -2.03
LHX1P48742 AC090096.1-201ENST00000489168 390 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AC140059.1-201ENST00000489238 361 ntBASIC2.4□□□□□ -2.03
LHX1P48742 ANXA2P1-201ENST00000505539 926 ntBASIC2.4□□□□□ -2.03
LHX1P48742 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.4□□□□□ -2.03
LHX1P48742 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.4□□□□□ -2.03
LHX1P48742 SNORA19.2-201ENST00000516013 114 ntBASIC2.4□□□□□ -2.03
LHX1P48742 RNU6-718P-201ENST00000516166 105 ntBASIC2.4□□□□□ -2.03
LHX1P48742 COPS8P3-201ENST00000526024 482 ntBASIC2.4□□□□□ -2.03
LHX1P48742 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.03
LHX1P48742 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.4□□□□□ -2.03
LHX1P48742 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.4□□□□□ -2.03
LHX1P48742 AL357078.3-201ENST00000607528 618 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AC122108.2-201ENST00000611946 526 ntBASIC2.4□□□□□ -2.03
LHX1P48742 uc_338.15-201ENST00000615470 191 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.03
LHX1P48742 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LHX1P48742 RNU6-428P-201ENST00000362942 107 ntBASIC2.39□□□□□ -2.03
LHX1P48742 Y_RNA.89-201ENST00000363031 102 ntBASIC2.39□□□□□ -2.03
LHX1P48742 U8.2-201ENST00000363156 134 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RNU6-336P-201ENST00000364891 107 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RNU6-827P-201ENST00000365553 106 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
LHX1P48742 EIF4E2P1-201ENST00000393781 255 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RNU4-26P-201ENST00000410270 107 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RN7SKP223-201ENST00000410582 62 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LHX1P48742 AL117339.3-201ENST00000418733 162 ntBASIC2.39□□□□□ -2.03
LHX1P48742 SNRPEP10-201ENST00000420249 274 ntBASIC2.39□□□□□ -2.03
LHX1P48742 EIF4EP4-201ENST00000424916 578 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RPS3AP44-201ENST00000425466 790 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AL139415.2-201ENST00000431968 163 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MTND1P4-201ENST00000435196 415 ntBASIC2.39□□□□□ -2.03
LHX1P48742 CR769767.1-201ENST00000436337 346 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AC007969.2-201ENST00000441891 191 ntBASIC2.39□□□□□ -2.03
LHX1P48742 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.39□□□□□ -2.03
LHX1P48742 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.39□□□□□ -2.03
LHX1P48742 AC124916.1-201ENST00000444020 547 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AC013470.1-201ENST00000453438 462 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RPL30P12-201ENST00000474666 353 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AK3P2-201ENST00000507976 429 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RNU6-1069P-201ENST00000516612 133 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AC109329.1-201ENST00000518744 317 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AC087854.1-201ENST00000519706 414 ntBASIC2.39□□□□□ -2.03
LHX1P48742 RNU6-323P-201ENST00000521915 107 ntBASIC2.39□□□□□ -2.03
LHX1P48742 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.39□□□□□ -2.03
LHX1P48742 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.39□□□□□ -2.03
LHX1P48742 AC023824.2-201ENST00000566185 400 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MIR5571-201ENST00000577998 113 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MIR4446-201ENST00000578505 67 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AL121757.2-201ENST00000611223 313 ntBASIC2.39□□□□□ -2.03
LHX1P48742 AC084782.3-201ENST00000612282 578 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
LHX1P48742 MIR3688-2-201ENST00000636963 87 ntBASIC2.39□□□□□ -2.03
LHX1P48742 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.39□□□□□ -2.03
LHX1P48742 AC002543.1-201ENST00000299783 1954 ntBASIC2.38□□□□□ -2.03
LHX1P48742 AC121333.1-201ENST00000567488 2709 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNU6-212P-201ENST00000362642 104 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNU6-522P-201ENST00000364497 107 ntBASIC2.38□□□□□ -2.03
LHX1P48742 Y_RNA.295-201ENST00000364918 102 ntBASIC2.38□□□□□ -2.03
LHX1P48742 Y_RNA.505-201ENST00000384489 102 ntBASIC2.38□□□□□ -2.03
LHX1P48742 MIR186-201ENST00000384988 86 ntBASIC2.38□□□□□ -2.03
LHX1P48742 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms