Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU6-837P-201ENST00000391056 108 ntBASIC2.13□□□□□ -2.07
ATRXP46100 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATRXP46100 AL138878.1-201ENST00000405131 347 ntBASIC2.13□□□□□ -2.07
ATRXP46100 RNA5SP111-201ENST00000411386 101 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AL513331.1-201ENST00000411908 397 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC099548.1-201ENST00000421443 426 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC012498.1-201ENST00000424037 437 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC008267.5-201ENST00000424928 265 ntBASIC2.13□□□□□ -2.07
ATRXP46100 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.13□□□□□ -2.07
ATRXP46100 AL591212.2-201ENST00000433923 257 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.13□□□□□ -2.07
ATRXP46100 AL121871.1-201ENST00000443413 436 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.13□□□□□ -2.07
ATRXP46100 RPL7P5-201ENST00000471472 736 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.13□□□□□ -2.07
ATRXP46100 PTP4A1P4-201ENST00000512479 322 ntBASIC2.13□□□□□ -2.07
ATRXP46100 RNU6-559P-201ENST00000516151 98 ntBASIC2.13□□□□□ -2.07
ATRXP46100 Y_RNA.665-201ENST00000516177 98 ntBASIC2.13□□□□□ -2.07
ATRXP46100 RN7SKP60-201ENST00000516985 239 ntBASIC2.13□□□□□ -2.07
ATRXP46100 SNORA25.17-201ENST00000517184 124 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.13□□□□□ -2.07
ATRXP46100 AC093012.1-202ENST00000549403 582 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.13□□□□□ -2.07
ATRXP46100 AL022345.1-201ENST00000607292 135 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC090132.2-201ENST00000615881 347 ntBASIC2.13□□□□□ -2.07
ATRXP46100 FRG1KP-201ENST00000623592 341 ntBASIC2.13□□□□□ -2.07
ATRXP46100 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATRXP46100 AL355596.1-201ENST00000565399 3996 ntBASIC2.13□□□□□ -2.07
ATRXP46100 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATRXP46100 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATRXP46100 RNU6-942P-201ENST00000363002 107 ntBASIC2.13□□□□□ -2.07
ATRXP46100 RNU6-179P-201ENST00000363350 107 ntBASIC2.13□□□□□ -2.07
ATRXP46100 RNU6-715P-201ENST00000365204 103 ntBASIC2.13□□□□□ -2.07
ATRXP46100 Y_RNA.387-201ENST00000383918 102 ntBASIC2.13□□□□□ -2.07
ATRXP46100 Y_RNA.605-201ENST00000410577 105 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.13□□□□□ -2.07
ATRXP46100 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.13□□□□□ -2.07
ATRXP46100 MTCO2P29-201ENST00000465212 189 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC006512.1-201ENST00000468816 291 ntBASIC2.13□□□□□ -2.07
ATRXP46100 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.13□□□□□ -2.07
ATRXP46100 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.13□□□□□ -2.07
ATRXP46100 AP004371.1-201ENST00000525240 214 ntBASIC2.13□□□□□ -2.07
ATRXP46100 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.13□□□□□ -2.07
ATRXP46100 AC110588.1-201ENST00000559699 137 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AP001330.4-201ENST00000604350 154 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC019159.1-201ENST00000605094 187 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.13□□□□□ -2.07
ATRXP46100 SDR42E1P2-201ENST00000614861 481 ntBASIC2.13□□□□□ -2.07
ATRXP46100 uc_338.22-201ENST00000622722 187 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AC097372.5-201ENST00000623665 376 ntBASIC2.13□□□□□ -2.07
ATRXP46100 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATRXP46100 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.12□□□□□ -2.07
ATRXP46100 AC007336.1-201ENST00000576365 3828 ntBASIC2.12□□□□□ -2.07
ATRXP46100 RNU6-50P-201ENST00000362356 103 ntBASIC2.12□□□□□ -2.07
ATRXP46100 Y_RNA.216-201ENST00000364205 93 ntBASIC2.12□□□□□ -2.07
ATRXP46100 MIR518D-201ENST00000385014 87 ntBASIC2.12□□□□□ -2.07
ATRXP46100 Z98941.1-201ENST00000407764 100 ntBASIC2.12□□□□□ -2.07
ATRXP46100 GTF2IP13-201ENST00000438487 386 ntBASIC2.12□□□□□ -2.07
ATRXP46100 RPL21P103-201ENST00000479921 488 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AC090096.1-201ENST00000489168 390 ntBASIC2.12□□□□□ -2.07
ATRXP46100 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.12□□□□□ -2.07
ATRXP46100 VWA8P1-201ENST00000510889 176 ntBASIC2.12□□□□□ -2.07
ATRXP46100 RNU6-1088P-201ENST00000516850 104 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 AC068446.3-201ENST00000555285 382 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AL355836.1-201ENST00000555951 870 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AC018638.8-201ENST00000588755 281 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.12□□□□□ -2.07
ATRXP46100 AL355802.3-201ENST00000607571 545 ntBASIC2.12□□□□□ -2.07
ATRXP46100 RNU6-1249P-201ENST00000363237 111 ntBASIC2.12□□□□□ -2.07
ATRXP46100 SNORD114-22-201ENST00000365423 72 ntBASIC2.12□□□□□ -2.07
ATRXP46100 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATRXP46100 Y_RNA.399-201ENST00000383955 105 ntBASIC2.12□□□□□ -2.07
ATRXP46100 RNU6-601P-201ENST00000384540 107 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 AL451074.5-201ENST00000415894 435 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AC009302.1-201ENST00000417147 390 ntBASIC2.12□□□□□ -2.07
ATRXP46100 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 AL139396.1-201ENST00000421137 167 ntBASIC2.12□□□□□ -2.07
ATRXP46100 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.12□□□□□ -2.07
ATRXP46100 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.12□□□□□ -2.07
ATRXP46100 AL163153.1-201ENST00000554223 283 ntBASIC2.12□□□□□ -2.07
ATRXP46100 DNAJC19P9-201ENST00000555084 351 ntBASIC2.12□□□□□ -2.07
ATRXP46100 MTCO3P13-201ENST00000577757 781 ntBASIC2.12□□□□□ -2.07
ATRXP46100 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ATRXP46100 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
ATRXP46100 RNU6-78P-201ENST00000362897 107 ntBASIC2.11□□□□□ -2.07
ATRXP46100 RNU6-173P-201ENST00000364215 104 ntBASIC2.11□□□□□ -2.07
ATRXP46100 RNU6-805P-201ENST00000365643 106 ntBASIC2.11□□□□□ -2.07
ATRXP46100 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ATRXP46100 SNORA41-201ENST00000384675 132 ntBASIC2.11□□□□□ -2.07
ATRXP46100 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.11□□□□□ -2.07
ATRXP46100 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms