Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFRSF4P43489 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFRSF4P43489 LRRC37A5P-203ENST00000580181 585 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 MIR5583-1-201ENST00000580941 59 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFRSF4P43489 AL121917.1-203ENST00000605534 577 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 AC104237.2-201ENST00000612456 443 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 U4atac.1-201ENST00000618345 95 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 YWHAEP7-203ENST00000622054 312 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TNFRSF4P43489 RNU1-72P-201ENST00000362976 153 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 RNU1-51P-201ENST00000365345 176 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TNFRSF4P43489 Y_RNA.402-201ENST00000383972 102 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 SNORD115-47-201ENST00000391226 86 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 RN7SKP158-201ENST00000410453 326 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 OR9R1P-201ENST00000412200 877 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 MTCO1P20-201ENST00000425366 358 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 SEPT14P3-201ENST00000439401 183 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL732372.2-207ENST00000445840 183 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 SEPT14P2-201ENST00000453405 183 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 Y_RNA.638-201ENST00000459374 113 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 MTCO3P9-201ENST00000506989 781 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TNFRSF4P43489 SEPT14P4-201ENST00000513445 186 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 RNU6-718P-201ENST00000516166 105 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AC109329.1-201ENST00000518744 317 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 FO082796.1-201ENST00000523795 183 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AP003033.1-201ENST00000527244 415 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AC109635.3-201ENST00000529536 185 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL137161.1-201ENST00000532231 390 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL157687.1-201ENST00000554853 619 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AL162413.1-201ENST00000603198 110 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 uc_338.34-201ENST00000617467 174 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFRSF4P43489 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TNFRSF4P43489 MTND4P5-201ENST00000435821 1374 ntBASIC2.19□□□□□ -2.06
TNFRSF4P43489 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TNFRSF4P43489 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU5E-7P-201ENST00000365290 117 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 DEFA7P-201ENST00000382676 285 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 Y_RNA.450-201ENST00000384198 113 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU6-622P-201ENST00000384272 103 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU6-393P-201ENST00000384475 107 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU6-1127P-201ENST00000384580 107 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 MIR524-201ENST00000385242 87 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 SNORD70.1-201ENST00000391007 85 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU2-3P-201ENST00000410144 191 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU6-1140P-201ENST00000410517 106 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 AC074117.2-201ENST00000417130 397 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 UBE2V1P8-201ENST00000437166 265 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 AL161788.1-201ENST00000441805 169 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 LRRC34P2-201ENST00000514850 553 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 RNU6-835P-201ENST00000516974 104 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 SNORA31.23-201ENST00000517219 133 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 MTND4P7-201ENST00000523876 130 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 MTND1P35-201ENST00000526739 508 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 AC090517.2-201ENST00000614966 680 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 uc_338.15-201ENST00000615470 191 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 AC008121.3-201ENST00000618726 433 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 AL031601.2-202ENST00000622650 282 ntBASIC2.18□□□□□ -2.06
TNFRSF4P43489 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFRSF4P43489 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFRSF4P43489 AL139276.1-201ENST00000311910 1001 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 MIR6073-201ENST00000352083 89 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 RNU6-78P-201ENST00000362897 107 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 RNU4-66P-201ENST00000365199 138 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 RNU6-434P-201ENST00000384376 107 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 MIR186-201ENST00000384988 86 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 RNU6-648P-201ENST00000410190 107 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 RNA5SP390-201ENST00000410191 113 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 RNU6-1068P-201ENST00000410958 103 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 EIF1P1-201ENST00000421436 341 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 AL669831.1-202ENST00000428504 417 ntBASIC2.17□□□□□ -2.06
TNFRSF4P43489 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFRSF4P43489 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFRSF4P43489 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms