Protein–RNA interactions for Protein: P43088

PTGFR, Prostaglandin F2-alpha receptor, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRP43088 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PTGFRP43088 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
PTGFRP43088 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PTGFRP43088 AC063943.3-201ENST00000615562 356 ntBASIC1.85□□□□□ -2.11
PTGFRP43088 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.85□□□□□ -2.11
PTGFRP43088 MIR3974-201ENST00000637126 96 ntBASIC1.85□□□□□ -2.11
PTGFRP43088 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PTGFRP43088 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.85□□□□□ -2.11
PTGFRP43088 AP000560.1-201ENST00000624150 1937 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RNA5SP289-201ENST00000362332 137 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 SNORD115-3-201ENST00000363100 82 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 Y_RNA.159-201ENST00000363674 87 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RNU6-1141P-201ENST00000364520 107 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RNU6-336P-201ENST00000364891 107 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RNU6-903P-201ENST00000391270 109 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RPS29P13-201ENST00000402041 169 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC090960.1-201ENST00000421072 306 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 MTCO2P34-201ENST00000421994 607 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC098826.2-201ENST00000452011 651 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.84□□□□□ -2.11
PTGFRP43088 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.84□□□□□ -2.11
PTGFRP43088 MRPS17P9-201ENST00000511924 393 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC069113.1-201ENST00000517763 267 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.84□□□□□ -2.11
PTGFRP43088 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.84□□□□□ -2.11
PTGFRP43088 AL356057.1-201ENST00000533798 831 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC022880.1-201ENST00000534017 973 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.84□□□□□ -2.11
PTGFRP43088 MTND3P12-201ENST00000559068 328 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.84□□□□□ -2.11
PTGFRP43088 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.84□□□□□ -2.11
PTGFRP43088 AC243960.4-201ENST00000600532 288 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AL356157.2-201ENST00000605122 111 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AC002044.1-201ENST00000606707 158 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.84□□□□□ -2.11
PTGFRP43088 AC136475.10-201ENST00000620253 385 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 IGHVIII-44-202ENST00000636235 289 ntBASIC1.84□□□□□ -2.11
PTGFRP43088 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PTGFRP43088 RNU6-552P-201ENST00000362869 119 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU6-428P-201ENST00000362942 107 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU6-266P-201ENST00000364225 107 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU6-142P-201ENST00000384019 107 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU6-1103P-201ENST00000384150 107 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 SNORA75-201ENST00000384158 137 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU6-43P-201ENST00000384302 107 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 BTF3L4P2-201ENST00000392798 346 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RPL17P50-201ENST00000396131 546 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 GSTA9P-201ENST00000406231 611 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 MIR1283-2-201ENST00000408621 87 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU4-53P-201ENST00000410828 140 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.83□□□□□ -2.12
PTGFRP43088 AL117339.3-201ENST00000418733 162 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AL139413.1-201ENST00000421309 217 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.83□□□□□ -2.12
PTGFRP43088 RPL23AP7-203ENST00000449021 469 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AL021397.1-201ENST00000451806 248 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU7-63P-201ENST00000459054 62 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 RNU7-167P-201ENST00000459160 62 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AC009646.1-201ENST00000510455 318 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 MTND3P5-201ENST00000512798 333 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 SCARNA16.3-201ENST00000516595 184 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AC026407.1-201ENST00000518369 204 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.83□□□□□ -2.12
PTGFRP43088 AGGF1P4-201ENST00000568249 801 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.83□□□□□ -2.12
PTGFRP43088 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.83□□□□□ -2.12
PTGFRP43088 AC008749.1-201ENST00000597650 306 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AC073648.5-201ENST00000603502 305 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AL034555.1-201ENST00000604816 211 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTGFRP43088 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
PTGFRP43088 ELL2P3-201ENST00000457883 1602 ntBASIC1.83□□□□□ -2.12
PTGFRP43088 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTGFRP43088 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
PTGFRP43088 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PTGFRP43088 Y_RNA.99-201ENST00000363138 105 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 RNU6-692P-201ENST00000384496 107 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.82□□□□□ -2.12
PTGFRP43088 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.82□□□□□ -2.12
PTGFRP43088 AC078809.1-201ENST00000427601 140 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 AC073464.1-201ENST00000429823 534 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.82□□□□□ -2.12
PTGFRP43088 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.82□□□□□ -2.12
PTGFRP43088 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.82□□□□□ -2.12
PTGFRP43088 AC132942.1-201ENST00000486753 483 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.82□□□□□ -2.12
PTGFRP43088 AC010486.3-201ENST00000511602 785 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PTGFRP43088 AP002770.2-201ENST00000543613 532 ntBASIC1.82□□□□□ -2.12
PTGFRP43088 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms