Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Z94722.1-201ENST00000604328 474 ntBASIC1.73□□□□□ -2.13
RORAP35398 MIR98-201ENST00000606724 119 ntBASIC1.73□□□□□ -2.13
RORAP35398 AC063944.3-201ENST00000609969 533 ntBASIC1.73□□□□□ -2.13
RORAP35398 AC091834.1-201ENST00000614543 472 ntBASIC1.73□□□□□ -2.13
RORAP35398 AC026585.1-201ENST00000619582 524 ntBASIC1.73□□□□□ -2.13
RORAP35398 AL159153.1-201ENST00000619688 317 ntBASIC1.73□□□□□ -2.13
RORAP35398 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
RORAP35398 AC090517.3-201ENST00000625170 141 ntBASIC1.73□□□□□ -2.13
RORAP35398 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
RORAP35398 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RORAP35398 RNU6-655P-201ENST00000362858 107 ntBASIC1.72□□□□□ -2.13
RORAP35398 U3.4-201ENST00000363352 213 ntBASIC1.72□□□□□ -2.13
RORAP35398 RNU6-1303P-201ENST00000364841 107 ntBASIC1.72□□□□□ -2.13
RORAP35398 RNU6-108P-201ENST00000365558 107 ntBASIC1.72□□□□□ -2.13
RORAP35398 MIR454-201ENST00000390180 115 ntBASIC1.72□□□□□ -2.13
RORAP35398 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
RORAP35398 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
RORAP35398 RNA5SP390-201ENST00000410191 113 ntBASIC1.72□□□□□ -2.13
RORAP35398 C1DP2-201ENST00000418167 426 ntBASIC1.72□□□□□ -2.13
RORAP35398 AC092447.3-201ENST00000426027 686 ntBASIC1.72□□□□□ -2.13
RORAP35398 AC007969.2-201ENST00000441891 191 ntBASIC1.72□□□□□ -2.13
RORAP35398 RPS27AP8-201ENST00000452665 445 ntBASIC1.72□□□□□ -2.13
RORAP35398 AL353752.1-201ENST00000454946 260 ntBASIC1.72□□□□□ -2.13
RORAP35398 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.72□□□□□ -2.13
RORAP35398 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.72□□□□□ -2.13
RORAP35398 CYCSP27-201ENST00000527643 293 ntBASIC1.72□□□□□ -2.13
RORAP35398 NDUFA5P6-201ENST00000542110 379 ntBASIC1.72□□□□□ -2.13
RORAP35398 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
RORAP35398 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.72□□□□□ -2.13
RORAP35398 SEPT7P9-203ENST00000604116 343 ntBASIC1.72□□□□□ -2.13
RORAP35398 AL670379.2-201ENST00000604983 252 ntBASIC1.72□□□□□ -2.13
RORAP35398 AC091931.1-201ENST00000623488 728 ntBASIC1.72□□□□□ -2.13
RORAP35398 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.71□□□□□ -2.14
RORAP35398 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RORAP35398 SNORD56.1-201ENST00000362913 68 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNU6-1210P-201ENST00000363775 107 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNU6-944P-201ENST00000364023 107 ntBASIC1.71□□□□□ -2.14
RORAP35398 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNU4-91P-201ENST00000364778 135 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNU6-45P-201ENST00000384471 107 ntBASIC1.71□□□□□ -2.14
RORAP35398 SNORA8-201ENST00000384574 139 ntBASIC1.71□□□□□ -2.14
RORAP35398 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.71□□□□□ -2.14
RORAP35398 BX295541.1-201ENST00000417774 250 ntBASIC1.71□□□□□ -2.14
RORAP35398 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 AL358453.1-201ENST00000422522 250 ntBASIC1.71□□□□□ -2.14
RORAP35398 AC079781.2-201ENST00000446424 169 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNU6-250P-201ENST00000516958 103 ntBASIC1.71□□□□□ -2.14
RORAP35398 RNU6-667P-201ENST00000517186 102 ntBASIC1.71□□□□□ -2.14
RORAP35398 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.71□□□□□ -2.14
RORAP35398 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.71□□□□□ -2.14
RORAP35398 AP002453.2-201ENST00000533503 320 ntBASIC1.71□□□□□ -2.14
RORAP35398 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 HSBP1P1-201ENST00000555205 166 ntBASIC1.71□□□□□ -2.14
RORAP35398 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 MIR3913-1-201ENST00000577744 102 ntBASIC1.71□□□□□ -2.14
RORAP35398 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.71□□□□□ -2.14
RORAP35398 Z82243.1-201ENST00000609432 473 ntBASIC1.71□□□□□ -2.14
RORAP35398 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
RORAP35398 RNU6-212P-201ENST00000362642 104 ntBASIC1.7□□□□□ -2.14
RORAP35398 RNU6-715P-201ENST00000365204 103 ntBASIC1.7□□□□□ -2.14
RORAP35398 AL627390.1-201ENST00000396055 340 ntBASIC1.7□□□□□ -2.14
RORAP35398 AL033519.2-201ENST00000403958 392 ntBASIC1.7□□□□□ -2.14
RORAP35398 OR9R1P-201ENST00000412200 877 ntBASIC1.7□□□□□ -2.14
RORAP35398 RPS29P15-201ENST00000458329 171 ntBASIC1.7□□□□□ -2.14
RORAP35398 AP003392.2-201ENST00000527269 208 ntBASIC1.7□□□□□ -2.14
RORAP35398 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.7□□□□□ -2.14
RORAP35398 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.7□□□□□ -2.14
RORAP35398 AP000763.2-201ENST00000540641 163 ntBASIC1.7□□□□□ -2.14
RORAP35398 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.7□□□□□ -2.14
RORAP35398 AC137800.2-201ENST00000574375 120 ntBASIC1.7□□□□□ -2.14
RORAP35398 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.7□□□□□ -2.14
RORAP35398 AC078795.2-201ENST00000602835 1252 ntBASIC1.7□□□□□ -2.14
RORAP35398 AL078605.1-201ENST00000603529 500 ntBASIC1.7□□□□□ -2.14
RORAP35398 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.7□□□□□ -2.14
RORAP35398 Z69720.2-201ENST00000624755 279 ntBASIC1.7□□□□□ -2.14
RORAP35398 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RORAP35398 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
RORAP35398 RNU6-1097P-201ENST00000363586 107 ntBASIC1.69□□□□□ -2.14
RORAP35398 RNU6-1029P-201ENST00000384109 107 ntBASIC1.69□□□□□ -2.14
RORAP35398 CBX3P9-201ENST00000402326 552 ntBASIC1.69□□□□□ -2.14
RORAP35398 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.69□□□□□ -2.14
RORAP35398 BTF3L4P1-201ENST00000413813 468 ntBASIC1.69□□□□□ -2.14
RORAP35398 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RORAP35398 MTND2P29-201ENST00000438595 412 ntBASIC1.69□□□□□ -2.14
RORAP35398 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.69□□□□□ -2.14
RORAP35398 AC244505.5-201ENST00000443639 207 ntBASIC1.69□□□□□ -2.14
RORAP35398 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.69□□□□□ -2.14
RORAP35398 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.69□□□□□ -2.14
RORAP35398 RNA5SP57-201ENST00000459463 123 ntBASIC1.69□□□□□ -2.14
RORAP35398 MTCO2P6-201ENST00000463134 685 ntBASIC1.69□□□□□ -2.14
RORAP35398 RPL30P12-201ENST00000474666 353 ntBASIC1.69□□□□□ -2.14
RORAP35398 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.69□□□□□ -2.14
RORAP35398 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.69□□□□□ -2.14
RORAP35398 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.69□□□□□ -2.14
RORAP35398 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
RORAP35398 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms