Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR3667-201ENST00000581025 74 ntBASIC3.61□□□□□ -1.83
ATF4P18848 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF4P18848 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF4P18848 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATF4P18848 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
ATF4P18848 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATF4P18848 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
ATF4P18848 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
ATF4P18848 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ATF4P18848 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF4P18848 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ATF4P18848 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF4P18848 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF4P18848 AC125257.1-201ENST00000560400 2930 ntBASIC3.6□□□□□ -1.83
ATF4P18848 RNA5SP151-201ENST00000365632 117 ntBASIC3.6□□□□□ -1.83
ATF4P18848 Z98745.1-201ENST00000402553 494 ntBASIC3.6□□□□□ -1.83
ATF4P18848 SNORA3C-201ENST00000408792 125 ntBASIC3.6□□□□□ -1.83
ATF4P18848 RNA5SP113-201ENST00000410486 84 ntBASIC3.6□□□□□ -1.83
ATF4P18848 AC112498.1-201ENST00000444401 332 ntBASIC3.6□□□□□ -1.83
ATF4P18848 UQCRBP2-201ENST00000447827 297 ntBASIC3.6□□□□□ -1.83
ATF4P18848 AC007395.1-201ENST00000451333 677 ntBASIC3.6□□□□□ -1.83
ATF4P18848 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.6□□□□□ -1.83
ATF4P18848 AC011276.1-201ENST00000469688 323 ntBASIC3.6□□□□□ -1.83
ATF4P18848 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.6□□□□□ -1.83
ATF4P18848 MIR5006-201ENST00000583027 110 ntBASIC3.6□□□□□ -1.83
ATF4P18848 AC022726.1-201ENST00000587475 207 ntBASIC3.6□□□□□ -1.83
ATF4P18848 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.6□□□□□ -1.83
ATF4P18848 AC069294.1-201ENST00000608397 350 ntBASIC3.6□□□□□ -1.83
ATF4P18848 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF4P18848 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ATF4P18848 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.6□□□□□ -1.83
ATF4P18848 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF4P18848 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF4P18848 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.59□□□□□ -1.83
ATF4P18848 MFSD8-242ENST00000641690 4199 ntBASIC3.59□□□□□ -1.83
ATF4P18848 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
ATF4P18848 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 AC079741.1-201ENST00000321498 212 ntBASIC3.59□□□□□ -1.83
ATF4P18848 RNU6-505P-201ENST00000384427 107 ntBASIC3.59□□□□□ -1.83
ATF4P18848 SNORD115-46-201ENST00000390982 71 ntBASIC3.59□□□□□ -1.83
ATF4P18848 MIR1289-1-201ENST00000408836 144 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 AC126124.2-201ENST00000413542 321 ntBASIC3.59□□□□□ -1.83
ATF4P18848 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 RPL30P4-201ENST00000429309 333 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.59□□□□□ -1.83
ATF4P18848 AC083863.1-201ENST00000438811 231 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AC004386.2-201ENST00000441858 148 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.59□□□□□ -1.83
ATF4P18848 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AC074133.1-201ENST00000515696 183 ntBASIC3.59□□□□□ -1.83
ATF4P18848 SNORA40.9-201ENST00000515895 93 ntBASIC3.59□□□□□ -1.83
ATF4P18848 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.59□□□□□ -1.83
ATF4P18848 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.59□□□□□ -1.83
ATF4P18848 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 MIR5699-201ENST00000578903 90 ntBASIC3.59□□□□□ -1.83
ATF4P18848 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 AC010620.2-201ENST00000600135 313 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AC062037.2-201ENST00000610137 73 ntBASIC3.59□□□□□ -1.83
ATF4P18848 AC107871.2-201ENST00000612894 502 ntBASIC3.59□□□□□ -1.83
ATF4P18848 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 AC244205.2-202ENST00000635781 342 ntBASIC3.59□□□□□ -1.83
ATF4P18848 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATF4P18848 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ATF4P18848 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.59□□□□□ -1.84
ATF4P18848 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATF4P18848 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.58□□□□□ -1.84
ATF4P18848 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATF4P18848 Y_RNA.26-201ENST00000362539 101 ntBASIC3.58□□□□□ -1.84
ATF4P18848 RNU1-18P-201ENST00000363062 164 ntBASIC3.58□□□□□ -1.84
ATF4P18848 Y_RNA.376-201ENST00000365638 108 ntBASIC3.58□□□□□ -1.84
ATF4P18848 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
ATF4P18848 AC068538.1-201ENST00000376856 336 ntBASIC3.58□□□□□ -1.84
ATF4P18848 Y_RNA.396-201ENST00000383949 103 ntBASIC3.58□□□□□ -1.84
ATF4P18848 Y_RNA.462-201ENST00000384268 102 ntBASIC3.58□□□□□ -1.84
ATF4P18848 MIR298-201ENST00000401212 88 ntBASIC3.58□□□□□ -1.84
ATF4P18848 RNU5A-5P-201ENST00000411054 116 ntBASIC3.58□□□□□ -1.84
ATF4P18848 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.58□□□□□ -1.84
ATF4P18848 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.58□□□□□ -1.84
ATF4P18848 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.58□□□□□ -1.84
ATF4P18848 RN7SL738P-201ENST00000470264 297 ntBASIC3.58□□□□□ -1.84
ATF4P18848 AC006463.2-201ENST00000473326 348 ntBASIC3.58□□□□□ -1.84
ATF4P18848 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.58□□□□□ -1.84
ATF4P18848 RNU6-408P-201ENST00000515910 100 ntBASIC3.58□□□□□ -1.84
ATF4P18848 RNU2-44P-201ENST00000516795 194 ntBASIC3.58□□□□□ -1.84
ATF4P18848 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.58□□□□□ -1.84
ATF4P18848 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.58□□□□□ -1.84
ATF4P18848 AC110588.1-201ENST00000559699 137 ntBASIC3.58□□□□□ -1.84
ATF4P18848 MIR4300-201ENST00000581016 96 ntBASIC3.58□□□□□ -1.84
ATF4P18848 AC105245.1-201ENST00000581934 244 ntBASIC3.58□□□□□ -1.84
ATF4P18848 MZT1P2-201ENST00000604387 248 ntBASIC3.58□□□□□ -1.84
ATF4P18848 MIR7641-1-201ENST00000627518 61 ntBASIC3.58□□□□□ -1.84
ATF4P18848 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ATF4P18848 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ATF4P18848 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ATF4P18848 SNORA18.2-201ENST00000383865 132 ntBASIC3.57□□□□□ -1.84
ATF4P18848 SNORD63-201ENST00000384262 68 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms