Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.73□□□□□ -1.97
PCNAP12004 MIR3976-201ENST00000606807 139 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.73□□□□□ -1.97
PCNAP12004 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.73□□□□□ -1.97
PCNAP12004 AC009233.1-201ENST00000616477 371 ntBASIC2.73□□□□□ -1.97
PCNAP12004 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.73□□□□□ -1.97
PCNAP12004 AC010297.1-201ENST00000623948 149 ntBASIC2.73□□□□□ -1.97
PCNAP12004 MIR3529-201ENST00000637713 78 ntBASIC2.73□□□□□ -1.97
PCNAP12004 MIR1302-1-201ENST00000637932 143 ntBASIC2.73□□□□□ -1.97
PCNAP12004 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCNAP12004 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCNAP12004 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.72□□□□□ -1.97
PCNAP12004 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PCNAP12004 RNA5SP393-201ENST00000363423 117 ntBASIC2.72□□□□□ -1.97
PCNAP12004 RNU6-1059P-201ENST00000363752 98 ntBASIC2.72□□□□□ -1.97
PCNAP12004 RNA5SP387-201ENST00000364226 106 ntBASIC2.72□□□□□ -1.97
PCNAP12004 MIR517A-201ENST00000385001 87 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AL360182.1-201ENST00000397433 468 ntBASIC2.72□□□□□ -1.97
PCNAP12004 RNU6-1328P-201ENST00000410938 106 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.72□□□□□ -1.97
PCNAP12004 AC074085.1-201ENST00000413598 418 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AC107399.1-201ENST00000451226 265 ntBASIC2.72□□□□□ -1.97
PCNAP12004 SNRPGP7-201ENST00000469016 106 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.72□□□□□ -1.97
PCNAP12004 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.72□□□□□ -1.97
PCNAP12004 PTP4A1P4-201ENST00000512479 322 ntBASIC2.72□□□□□ -1.97
PCNAP12004 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
PCNAP12004 RNU1-104P-201ENST00000517280 175 ntBASIC2.72□□□□□ -1.97
PCNAP12004 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.72□□□□□ -1.97
PCNAP12004 AC010186.2-204ENST00000537668 439 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.72□□□□□ -1.97
PCNAP12004 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.72□□□□□ -1.97
PCNAP12004 MIR4325-201ENST00000583049 90 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.72□□□□□ -1.97
PCNAP12004 AL049779.4-201ENST00000604500 156 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AC025253.1-201ENST00000613623 543 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AL161423.1-201ENST00000613700 262 ntBASIC2.72□□□□□ -1.97
PCNAP12004 MIR7515-201ENST00000637837 67 ntBASIC2.72□□□□□ -1.97
PCNAP12004 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
PCNAP12004 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PCNAP12004 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCNAP12004 SNORD62.1-201ENST00000362541 86 ntBASIC2.71□□□□□ -1.98
PCNAP12004 Y_RNA.333-201ENST00000365274 102 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RNU6-622P-201ENST00000384272 103 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RNU6-790P-201ENST00000384479 105 ntBASIC2.71□□□□□ -1.98
PCNAP12004 MIR544A-201ENST00000384855 91 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RNU6-1106P-201ENST00000390845 107 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RN7SKP158-201ENST00000410453 326 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AL645568.3-201ENST00000433683 316 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.71□□□□□ -1.98
PCNAP12004 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.71□□□□□ -1.98
PCNAP12004 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.71□□□□□ -1.98
PCNAP12004 AC112771.1-201ENST00000463581 102 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AC133134.1-201ENST00000466800 359 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RPS29P26-201ENST00000477483 171 ntBASIC2.71□□□□□ -1.98
PCNAP12004 MTCO1P29-201ENST00000496868 288 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RNU6-612P-201ENST00000516909 102 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.71□□□□□ -1.98
PCNAP12004 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.71□□□□□ -1.98
PCNAP12004 AC090897.2-201ENST00000581715 130 ntBASIC2.71□□□□□ -1.98
PCNAP12004 ZNF861P-201ENST00000588126 639 ntBASIC2.71□□□□□ -1.98
PCNAP12004 RPS15AP11-201ENST00000594193 385 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AL117336.2-201ENST00000602435 335 ntBASIC2.71□□□□□ -1.98
PCNAP12004 AC016727.1-205ENST00000605437 569 ntBASIC2.71□□□□□ -1.98
PCNAP12004 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PCNAP12004 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.98
PCNAP12004 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.71□□□□□ -1.98
PCNAP12004 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
PCNAP12004 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCNAP12004 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCNAP12004 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCNAP12004 Y_RNA.58-201ENST00000362807 102 ntBASIC2.7□□□□□ -1.98
PCNAP12004 RNU4-73P-201ENST00000363164 141 ntBASIC2.7□□□□□ -1.98
PCNAP12004 Y_RNA.154-201ENST00000363624 102 ntBASIC2.7□□□□□ -1.98
PCNAP12004 RNY3P1-201ENST00000365085 102 ntBASIC2.7□□□□□ -1.98
PCNAP12004 RNY3-201ENST00000365484 102 ntBASIC2.7□□□□□ -1.98
PCNAP12004 Y_RNA.490-201ENST00000384413 102 ntBASIC2.7□□□□□ -1.98
PCNAP12004 SNORA48.5-201ENST00000391143 135 ntBASIC2.7□□□□□ -1.98
PCNAP12004 U3.26-201ENST00000391236 204 ntBASIC2.7□□□□□ -1.98
PCNAP12004 RNU2-41P-201ENST00000410991 178 ntBASIC2.7□□□□□ -1.98
PCNAP12004 RPL37P10-201ENST00000412884 288 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.7□□□□□ -1.98
PCNAP12004 USP9YP30-201ENST00000430729 455 ntBASIC2.7□□□□□ -1.98
PCNAP12004 FABP5P14-201ENST00000437273 393 ntBASIC2.7□□□□□ -1.98
PCNAP12004 RPS3AP12-201ENST00000443616 753 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AL031659.1-201ENST00000447075 539 ntBASIC2.7□□□□□ -1.98
PCNAP12004 FTH1P25-201ENST00000447665 469 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
PCNAP12004 PCMTD1P1-201ENST00000455560 355 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AC091874.1-201ENST00000511402 339 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.7□□□□□ -1.98
PCNAP12004 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.7□□□□□ -1.98
PCNAP12004 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.7□□□□□ -1.98
PCNAP12004 AL355375.2-201ENST00000574825 175 ntBASIC2.7□□□□□ -1.98
PCNAP12004 FGF7P1-201ENST00000582820 288 ntBASIC2.7□□□□□ -1.98
PCNAP12004 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms