Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RN7SKP24-201ENST00000515888 284 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 RNU2-53P-201ENST00000516257 147 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 RNA5SP320-201ENST00000516263 124 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 AC025423.5-201ENST00000550230 219 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 AC103996.1-201ENST00000555468 102 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 RMST_3.1-201ENST00000611651 109 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 AC024614.3-201ENST00000637860 256 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 AC121333.1-201ENST00000567488 2709 ntBASIC2.4□□□□□ -2.03
RAB40ALP0C0E4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 Y_RNA.167-201ENST00000363735 109 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 RNU6-443P-201ENST00000384780 107 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 Y_RNA.619-201ENST00000410951 90 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC009963.1-201ENST00000417265 157 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 EIF1P1-201ENST00000421436 341 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 SRIP2-201ENST00000428470 166 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 MRPS10P2-201ENST00000431226 381 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 RPL39P29-201ENST00000447779 157 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 HMGN2P26-201ENST00000463169 339 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC090515.1-201ENST00000465295 476 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 TRBV12-1-201ENST00000479785 344 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 Y_RNA.665-201ENST00000516177 98 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 MIR5692C1-201ENST00000585309 91 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 BNIP3P16-201ENST00000589779 534 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 BNIP3P25-201ENST00000596023 559 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 RPL30P11-203ENST00000598995 310 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 MIR5739-201ENST00000619803 80 ntBASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
RAB40ALP0C0E4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNU1-72P-201ENST00000362976 153 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNU6-529P-201ENST00000363383 104 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNA5SP125-201ENST00000364843 120 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNU6-332P-201ENST00000391193 108 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 Y_RNA.615-201ENST00000410769 117 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNU2-63P-201ENST00000410792 194 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNU6-373P-201ENST00000411247 98 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 CYCSP48-201ENST00000417124 323 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 AC008267.5-201ENST00000424928 265 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RPS15AP10-201ENST00000432472 382 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 SRIP1-201ENST00000489235 288 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 AC008413.1-201ENST00000511864 177 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 RNA5SP24-201ENST00000516478 95 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 VN1R107P-201ENST00000601784 209 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 HMGB1P24-202ENST00000615653 685 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 AC064859.1-201ENST00000624741 174 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 MIR3662-201ENST00000637030 95 ntBASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RAB40ALP0C0E4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 RNU6-655P-201ENST00000362858 107 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 SNORA38-201ENST00000363946 132 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 U3.13-201ENST00000364804 214 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 SNORA70B-201ENST00000384210 135 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 MIR518C-201ENST00000384822 101 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 RPS29P13-201ENST00000402041 169 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 MIR1277-201ENST00000408536 78 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AC003685.2-201ENST00000422795 395 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AC243964.1-201ENST00000441814 261 ntBASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.37□□□□□ -2.03
RAB40ALP0C0E4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms