Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
MRPL3P09001 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
MRPL3P09001 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MRPL3P09001 RNU4-20P-201ENST00000365601 151 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 SNORA69-201ENST00000383895 132 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MRPL3P09001 RNU6-1140P-201ENST00000410517 106 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.65□□□□□ -2.15
MRPL3P09001 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.65□□□□□ -2.15
MRPL3P09001 AC009238.1-201ENST00000442165 424 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.65□□□□□ -2.15
MRPL3P09001 MTND1P1-201ENST00000445453 368 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC009237.6-201ENST00000446969 424 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AL353705.4-201ENST00000449661 238 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.65□□□□□ -2.15
MRPL3P09001 RNU6-261P-201ENST00000459506 102 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 SRRM1P2-201ENST00000464531 1192 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 RPL23AP42-201ENST00000471152 471 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC083798.1-201ENST00000472671 131 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 RPL36AP48-201ENST00000485521 314 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.65□□□□□ -2.15
MRPL3P09001 AC104136.1-201ENST00000512969 394 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.65□□□□□ -2.15
MRPL3P09001 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.65□□□□□ -2.15
MRPL3P09001 AC107953.1-201ENST00000522216 297 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.65□□□□□ -2.15
MRPL3P09001 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.65□□□□□ -2.15
MRPL3P09001 AL137161.1-201ENST00000532231 390 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.65□□□□□ -2.15
MRPL3P09001 MTCO3P23-201ENST00000561363 289 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.65□□□□□ -2.15
MRPL3P09001 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 MIR5692A1-201ENST00000580523 69 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC004223.2-201ENST00000590309 544 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC123912.5-201ENST00000605470 343 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 HULC.1-201ENST00000612720 240 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 U4atac.1-201ENST00000618345 95 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 U6.42-201ENST00000618440 107 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 uc_338.11-201ENST00000619132 160 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC024581.2-201ENST00000619986 252 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 RMST_7.1-201ENST00000621935 268 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 AC139792.2-201ENST00000624218 587 ntBASIC1.65□□□□□ -2.15
MRPL3P09001 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.65□□□□□ -2.15
MRPL3P09001 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.64□□□□□ -2.15
MRPL3P09001 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
MRPL3P09001 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
MRPL3P09001 RNU6-393P-201ENST00000384475 107 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 RNU6-648P-201ENST00000410190 107 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AL135786.1-201ENST00000415892 214 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.64□□□□□ -2.15
MRPL3P09001 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.64□□□□□ -2.15
MRPL3P09001 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.64□□□□□ -2.15
MRPL3P09001 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.64□□□□□ -2.15
MRPL3P09001 SNRPFP3-201ENST00000457792 225 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AC087884.1-201ENST00000469738 328 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 RPL22P13-201ENST00000493291 347 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AC074344.1-201ENST00000512823 224 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 RNA5SP401-201ENST00000515920 127 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 RNU6-506P-201ENST00000516553 94 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 Y_RNA.693-201ENST00000516641 110 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 SNORA25.17-201ENST00000517184 124 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.64□□□□□ -2.15
MRPL3P09001 TPRKBP2-201ENST00000565969 475 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AC002044.1-201ENST00000606707 158 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
MRPL3P09001 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.64□□□□□ -2.15
MRPL3P09001 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.64□□□□□ -2.15
MRPL3P09001 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MRPL3P09001 RNU1-72P-201ENST00000362976 153 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RNU6-1090P-201ENST00000364065 94 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 Y_RNA.324-201ENST00000365165 102 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RNU6-38P-201ENST00000384085 107 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RNU6-483P-201ENST00000384088 108 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 Y_RNA.510-201ENST00000384511 114 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RPL17P50-201ENST00000396131 546 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AL079342.1-201ENST00000401460 267 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RN7SKP223-201ENST00000410582 62 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL3P09001 AC097463.2-201ENST00000421074 142 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AC096920.1-201ENST00000423991 241 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AIMP1P2-201ENST00000425294 312 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL3P09001 PRPS1P1-201ENST00000445305 876 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
MRPL3P09001 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.63□□□□□ -2.15
MRPL3P09001 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RNU6-333P-201ENST00000459117 107 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AC112771.1-201ENST00000463581 102 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AP001025.1-201ENST00000486139 332 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 RPL38P4-201ENST00000502376 214 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.63□□□□□ -2.15
MRPL3P09001 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL3P09001 RNU6-1038P-201ENST00000516516 104 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 OR5AQ1P-201ENST00000527596 927 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.63□□□□□ -2.15
MRPL3P09001 AL512360.1-201ENST00000555346 234 ntBASIC1.63□□□□□ -2.15
MRPL3P09001 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.63□□□□□ -2.15
MRPL3P09001 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms