Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SNORA46.1-201ENST00000391069 153 ntBASIC2.26□□□□□ -2.05
VIMP08670 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
VIMP08670 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
VIMP08670 TPTE2P5-203ENST00000458118 728 ntBASIC2.26□□□□□ -2.05
VIMP08670 AC009646.1-201ENST00000510455 318 ntBASIC2.26□□□□□ -2.05
VIMP08670 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.26□□□□□ -2.05
VIMP08670 SNORA4.4-201ENST00000515921 135 ntBASIC2.26□□□□□ -2.05
VIMP08670 RNU6-835P-201ENST00000516974 104 ntBASIC2.26□□□□□ -2.05
VIMP08670 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.26□□□□□ -2.05
VIMP08670 AC103996.1-201ENST00000555468 102 ntBASIC2.26□□□□□ -2.05
VIMP08670 AL118558.2-201ENST00000556294 238 ntBASIC2.26□□□□□ -2.05
VIMP08670 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.26□□□□□ -2.05
VIMP08670 BNIP3P16-201ENST00000589779 534 ntBASIC2.26□□□□□ -2.05
VIMP08670 AL162373.1-201ENST00000620433 407 ntBASIC2.26□□□□□ -2.05
VIMP08670 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
VIMP08670 AC241585.2-209ENST00000638217 143 ntBASIC2.26□□□□□ -2.05
VIMP08670 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
VIMP08670 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VIMP08670 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VIMP08670 Y_RNA.41-201ENST00000362646 102 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNU4-40P-201ENST00000364351 143 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNU4-66P-201ENST00000365199 138 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNU4-20P-201ENST00000365601 151 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNU6-38P-201ENST00000384085 107 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNU6-780P-201ENST00000391030 104 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNA5SP184-201ENST00000411071 108 ntBASIC2.25□□□□□ -2.05
VIMP08670 MTCO3P41-201ENST00000414801 328 ntBASIC2.25□□□□□ -2.05
VIMP08670 MTND1P1-201ENST00000445453 368 ntBASIC2.25□□□□□ -2.05
VIMP08670 RNU6-333P-201ENST00000459117 107 ntBASIC2.25□□□□□ -2.05
VIMP08670 SNRPGP7-201ENST00000469016 106 ntBASIC2.25□□□□□ -2.05
VIMP08670 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.25□□□□□ -2.05
VIMP08670 AK3P2-201ENST00000507976 429 ntBASIC2.25□□□□□ -2.05
VIMP08670 AC008413.1-201ENST00000511864 177 ntBASIC2.25□□□□□ -2.05
VIMP08670 SNORA14.1-201ENST00000516113 141 ntBASIC2.25□□□□□ -2.05
VIMP08670 Y_RNA.693-201ENST00000516641 110 ntBASIC2.25□□□□□ -2.05
VIMP08670 CENPUP1-201ENST00000526649 1202 ntBASIC2.25□□□□□ -2.05
VIMP08670 CYCSP27-201ENST00000527643 293 ntBASIC2.25□□□□□ -2.05
VIMP08670 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.25□□□□□ -2.05
VIMP08670 AL512360.1-201ENST00000555346 234 ntBASIC2.25□□□□□ -2.05
VIMP08670 AC245505.1-201ENST00000556398 224 ntBASIC2.25□□□□□ -2.05
VIMP08670 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
VIMP08670 ELOCP5-201ENST00000604924 333 ntBASIC2.25□□□□□ -2.05
VIMP08670 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
VIMP08670 CENPCP1-201ENST00000533085 2578 ntBASIC2.24□□□□□ -2.05
VIMP08670 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
VIMP08670 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VIMP08670 RNU6-944P-201ENST00000364023 107 ntBASIC2.24□□□□□ -2.05
VIMP08670 RPS29P13-201ENST00000402041 169 ntBASIC2.24□□□□□ -2.05
VIMP08670 EDDM3CP-201ENST00000415977 425 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.24□□□□□ -2.05
VIMP08670 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.24□□□□□ -2.05
VIMP08670 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
VIMP08670 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.24□□□□□ -2.05
VIMP08670 RNA5SP233-201ENST00000459153 113 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC019235.1-201ENST00000503847 207 ntBASIC2.24□□□□□ -2.05
VIMP08670 RNU6-189P-201ENST00000516120 101 ntBASIC2.24□□□□□ -2.05
VIMP08670 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
VIMP08670 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
VIMP08670 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.24□□□□□ -2.05
VIMP08670 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.24□□□□□ -2.05
VIMP08670 AC008749.1-201ENST00000597650 306 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC092747.3-201ENST00000603769 301 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC092954.2-201ENST00000609103 430 ntBASIC2.24□□□□□ -2.05
VIMP08670 AC004908.3-201ENST00000610248 625 ntBASIC2.24□□□□□ -2.05
VIMP08670 AL161423.1-201ENST00000613700 262 ntBASIC2.24□□□□□ -2.05
VIMP08670 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.24□□□□□ -2.05
VIMP08670 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VIMP08670 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
VIMP08670 RNU6-1285P-201ENST00000363480 105 ntBASIC2.23□□□□□ -2.05
VIMP08670 Y_RNA.318-201ENST00000365131 97 ntBASIC2.23□□□□□ -2.05
VIMP08670 Y_RNA.378-201ENST00000365652 113 ntBASIC2.23□□□□□ -2.05
VIMP08670 RNU6-648P-201ENST00000410190 107 ntBASIC2.23□□□□□ -2.05
VIMP08670 RNA5SP270-201ENST00000411361 118 ntBASIC2.23□□□□□ -2.05
VIMP08670 POLHP1-201ENST00000411806 470 ntBASIC2.23□□□□□ -2.05
VIMP08670 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.23□□□□□ -2.05
VIMP08670 TIMM9P3-201ENST00000428659 274 ntBASIC2.23□□□□□ -2.05
VIMP08670 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.23□□□□□ -2.05
VIMP08670 RPL23AP7-203ENST00000449021 469 ntBASIC2.23□□□□□ -2.05
VIMP08670 RNU5F-2P-201ENST00000516066 82 ntBASIC2.23□□□□□ -2.05
VIMP08670 RN7SKP256-201ENST00000517201 314 ntBASIC2.23□□□□□ -2.05
VIMP08670 AC034114.1-201ENST00000520293 285 ntBASIC2.23□□□□□ -2.05
VIMP08670 GTF3AP2-201ENST00000557014 266 ntBASIC2.23□□□□□ -2.05
VIMP08670 AC233702.2-202ENST00000562547 291 ntBASIC2.23□□□□□ -2.05
VIMP08670 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.23□□□□□ -2.05
VIMP08670 AC025165.5-201ENST00000602802 578 ntBASIC2.23□□□□□ -2.05
VIMP08670 AC006023.1-201ENST00000603944 259 ntBASIC2.23□□□□□ -2.05
VIMP08670 uc_338.20-201ENST00000621563 178 ntBASIC2.23□□□□□ -2.05
VIMP08670 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.22□□□□□ -2.05
VIMP08670 RNU6-525P-201ENST00000363685 104 ntBASIC2.22□□□□□ -2.05
VIMP08670 RNU6-82P-201ENST00000363970 107 ntBASIC2.22□□□□□ -2.05
VIMP08670 Y_RNA.372-201ENST00000365599 102 ntBASIC2.22□□□□□ -2.05
VIMP08670 RNU6-43P-201ENST00000384302 107 ntBASIC2.22□□□□□ -2.05
VIMP08670 MIR518C-201ENST00000384822 101 ntBASIC2.22□□□□□ -2.05
VIMP08670 MIR29B2-201ENST00000385055 81 ntBASIC2.22□□□□□ -2.05
VIMP08670 SNORD73A-201ENST00000386062 65 ntBASIC2.22□□□□□ -2.05
VIMP08670 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
VIMP08670 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.22□□□□□ -2.05
VIMP08670 MTCO2P7-201ENST00000446518 666 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms