Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TPM3P06753 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.95□□□□□ -2.26
TPM3P06753 RNU6-413P-201ENST00000384115 107 ntBASIC0.94□□□□□ -2.26
TPM3P06753 MIR194-1-201ENST00000384892 85 ntBASIC0.94□□□□□ -2.26
TPM3P06753 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
TPM3P06753 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TPM3P06753 AP1B1P2-201ENST00000416196 106 ntBASIC0.94□□□□□ -2.26
TPM3P06753 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.94□□□□□ -2.26
TPM3P06753 AC099677.2-201ENST00000436385 175 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AL008629.1-201ENST00000438615 184 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AC007327.1-201ENST00000447461 264 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AC079140.3-201ENST00000511111 550 ntBASIC0.94□□□□□ -2.26
TPM3P06753 RNU5F-2P-201ENST00000516066 82 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.94□□□□□ -2.26
TPM3P06753 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM3P06753 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.94□□□□□ -2.26
TPM3P06753 MIR544B-201ENST00000582372 78 ntBASIC0.94□□□□□ -2.26
TPM3P06753 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM3P06753 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AL590229.1-201ENST00000603497 542 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AL391646.1-201ENST00000603860 190 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AC018889.1-201ENST00000605372 397 ntBASIC0.94□□□□□ -2.26
TPM3P06753 AC126544.2-201ENST00000625174 749 ntBASIC0.94□□□□□ -2.26
TPM3P06753 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
TPM3P06753 MIR515-2-201ENST00000384883 83 ntBASIC0.93□□□□□ -2.26
TPM3P06753 MIR515-1-201ENST00000384884 83 ntBASIC0.93□□□□□ -2.26
TPM3P06753 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.93□□□□□ -2.26
TPM3P06753 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.93□□□□□ -2.26
TPM3P06753 AC108667.1-201ENST00000428618 249 ntBASIC0.93□□□□□ -2.26
TPM3P06753 AC007969.2-201ENST00000441891 191 ntBASIC0.93□□□□□ -2.26
TPM3P06753 RPS4XP11-201ENST00000446897 772 ntBASIC0.93□□□□□ -2.26
TPM3P06753 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.93□□□□□ -2.26
TPM3P06753 RN7SKP88-201ENST00000516847 250 ntBASIC0.93□□□□□ -2.26
TPM3P06753 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.93□□□□□ -2.26
TPM3P06753 AC072039.2-201ENST00000608883 439 ntBASIC0.93□□□□□ -2.26
TPM3P06753 7SK.8-201ENST00000612110 250 ntBASIC0.93□□□□□ -2.26
TPM3P06753 7SK.11-201ENST00000615477 250 ntBASIC0.93□□□□□ -2.26
TPM3P06753 7SK.13-201ENST00000622040 250 ntBASIC0.93□□□□□ -2.26
TPM3P06753 AP000943.4-201ENST00000622912 357 ntBASIC0.93□□□□□ -2.26
TPM3P06753 SNORA63D-201ENST00000364359 132 ntBASIC0.92□□□□□ -2.26
TPM3P06753 RNU6-384P-201ENST00000364900 104 ntBASIC0.92□□□□□ -2.26
TPM3P06753 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TPM3P06753 SNORA12-201ENST00000391162 147 ntBASIC0.92□□□□□ -2.26
TPM3P06753 RAP1BP3-201ENST00000407180 549 ntBASIC0.92□□□□□ -2.26
TPM3P06753 RPL23AP30-201ENST00000432419 501 ntBASIC0.92□□□□□ -2.26
TPM3P06753 RPL31P3-201ENST00000458430 332 ntBASIC0.92□□□□□ -2.26
TPM3P06753 snoU13.30-201ENST00000458951 104 ntBASIC0.92□□□□□ -2.26
TPM3P06753 HMGN2P9-201ENST00000476875 229 ntBASIC0.92□□□□□ -2.26
TPM3P06753 MTCO3P9-201ENST00000506989 781 ntBASIC0.92□□□□□ -2.26
TPM3P06753 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.92□□□□□ -2.26
TPM3P06753 VN1R80P-201ENST00000597126 338 ntBASIC0.92□□□□□ -2.26
TPM3P06753 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
TPM3P06753 AL022345.2-201ENST00000606307 135 ntBASIC0.92□□□□□ -2.26
TPM3P06753 AC091965.4-201ENST00000607691 587 ntBASIC0.92□□□□□ -2.26
TPM3P06753 AL365434.2-201ENST00000607979 234 ntBASIC0.92□□□□□ -2.26
TPM3P06753 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
TPM3P06753 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
TPM3P06753 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.91□□□□□ -2.26
TPM3P06753 MIR378A-201ENST00000362177 66 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RNU4-15P-201ENST00000362613 141 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RNU6-1019P-201ENST00000364424 107 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RNU4-22P-201ENST00000411058 166 ntBASIC0.91□□□□□ -2.26
TPM3P06753 PIGFP2-201ENST00000421400 651 ntBASIC0.91□□□□□ -2.26
TPM3P06753 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.91□□□□□ -2.26
TPM3P06753 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
TPM3P06753 RN7SL429P-201ENST00000479090 223 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RN7SL489P-201ENST00000486185 223 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RN7SL327P-201ENST00000488659 223 ntBASIC0.91□□□□□ -2.26
TPM3P06753 AC108210.2-201ENST00000503681 201 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
TPM3P06753 CYCSP23-201ENST00000519781 313 ntBASIC0.91□□□□□ -2.26
TPM3P06753 MIR548AC-201ENST00000585049 88 ntBASIC0.91□□□□□ -2.26
TPM3P06753 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
TPM3P06753 AL021879.1-201ENST00000611756 288 ntBASIC0.91□□□□□ -2.26
TPM3P06753 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.91□□□□□ -2.26
TPM3P06753 RN7SL853P-201ENST00000617250 223 ntBASIC0.91□□□□□ -2.26
TPM3P06753 AL353997.5-201ENST00000618886 171 ntBASIC0.91□□□□□ -2.26
TPM3P06753 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.91□□□□□ -2.26
TPM3P06753 HSBP1P2-201ENST00000299671 229 ntBASIC0.9□□□□□ -2.27
TPM3P06753 Y_RNA.472-201ENST00000384322 102 ntBASIC0.9□□□□□ -2.27
TPM3P06753 RNU6-1176P-201ENST00000390955 107 ntBASIC0.9□□□□□ -2.27
TPM3P06753 MTCO3P41-201ENST00000414801 328 ntBASIC0.9□□□□□ -2.27
TPM3P06753 SNRPEP8-201ENST00000442866 260 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.9□□□□□ -2.27
TPM3P06753 ART2BP-201ENST00000453501 499 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.9□□□□□ -2.27
TPM3P06753 snoU13.23-201ENST00000458863 104 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AC115990.1-201ENST00000526957 301 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AC068587.4-201ENST00000533893 186 ntBASIC0.9□□□□□ -2.27
TPM3P06753 RNU6-87P-201ENST00000607561 108 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AL359547.2-201ENST00000615810 418 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AC006386.1-201ENST00000619436 415 ntBASIC0.9□□□□□ -2.27
TPM3P06753 AL121895.2-201ENST00000619558 447 ntBASIC0.9□□□□□ -2.27
TPM3P06753 RMST_7.1-201ENST00000621935 268 ntBASIC0.9□□□□□ -2.27
TPM3P06753 OR4G3P-201ENST00000633500 913 ntBASIC0.9□□□□□ -2.27
TPM3P06753 RNU6-723P-201ENST00000383973 107 ntBASIC0.89□□□□□ -2.27
TPM3P06753 RNU6-298P-201ENST00000390888 96 ntBASIC0.89□□□□□ -2.27
TPM3P06753 RNU2-64P-201ENST00000411315 191 ntBASIC0.89□□□□□ -2.27
TPM3P06753 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.89□□□□□ -2.27
TPM3P06753 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms