Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL591043.1-201ENST00000432461 424 ntBASIC2.65□□□□□ -1.99
RB1P06400 MTND1P4-201ENST00000435196 415 ntBASIC2.65□□□□□ -1.99
RB1P06400 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
RB1P06400 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.65□□□□□ -1.99
RB1P06400 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.65□□□□□ -1.99
RB1P06400 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.65□□□□□ -1.99
RB1P06400 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.65□□□□□ -1.99
RB1P06400 RNU7-138P-201ENST00000459479 64 ntBASIC2.65□□□□□ -1.99
RB1P06400 AP000852.1-201ENST00000472460 573 ntBASIC2.65□□□□□ -1.99
RB1P06400 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.65□□□□□ -1.99
RB1P06400 RNU6-377P-201ENST00000515965 102 ntBASIC2.65□□□□□ -1.99
RB1P06400 CKS1BP7-201ENST00000522230 235 ntBASIC2.65□□□□□ -1.99
RB1P06400 COPS8P3-201ENST00000526024 482 ntBASIC2.65□□□□□ -1.99
RB1P06400 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.65□□□□□ -1.99
RB1P06400 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
RB1P06400 AC084782.3-201ENST00000612282 578 ntBASIC2.65□□□□□ -1.99
RB1P06400 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
RB1P06400 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.65□□□□□ -1.99
RB1P06400 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RB1P06400 MIR3688-2-201ENST00000636963 87 ntBASIC2.65□□□□□ -1.99
RB1P06400 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
RB1P06400 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RB1P06400 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.64□□□□□ -1.99
RB1P06400 RNA5SP393-201ENST00000363423 117 ntBASIC2.64□□□□□ -1.99
RB1P06400 RNU6-527P-201ENST00000363425 104 ntBASIC2.64□□□□□ -1.99
RB1P06400 Y_RNA.573-201ENST00000384763 105 ntBASIC2.64□□□□□ -1.99
RB1P06400 RNU6-482P-201ENST00000391068 107 ntBASIC2.64□□□□□ -1.99
RB1P06400 SNORD115-47-201ENST00000391226 86 ntBASIC2.64□□□□□ -1.99
RB1P06400 RNA5SP390-201ENST00000410191 113 ntBASIC2.64□□□□□ -1.99
RB1P06400 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.64□□□□□ -1.99
RB1P06400 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.64□□□□□ -1.99
RB1P06400 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.64□□□□□ -1.99
RB1P06400 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.64□□□□□ -1.99
RB1P06400 RPL7P12-201ENST00000446719 750 ntBASIC2.64□□□□□ -1.99
RB1P06400 AL031274.1-201ENST00000450334 232 ntBASIC2.64□□□□□ -1.99
RB1P06400 AC013470.1-201ENST00000453438 462 ntBASIC2.64□□□□□ -1.99
RB1P06400 RN7SL297P-201ENST00000483161 293 ntBASIC2.64□□□□□ -1.99
RB1P06400 AC011352.1-201ENST00000512300 793 ntBASIC2.64□□□□□ -1.99
RB1P06400 SNORA19.2-201ENST00000516013 114 ntBASIC2.64□□□□□ -1.99
RB1P06400 RNU6-1069P-201ENST00000516612 133 ntBASIC2.64□□□□□ -1.99
RB1P06400 SNORA31.15-201ENST00000516771 132 ntBASIC2.64□□□□□ -1.99
RB1P06400 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.64□□□□□ -1.99
RB1P06400 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.64□□□□□ -1.99
RB1P06400 BNIP3P25-201ENST00000596023 559 ntBASIC2.64□□□□□ -1.99
RB1P06400 AC073410.2-201ENST00000603240 332 ntBASIC2.64□□□□□ -1.99
RB1P06400 AC097372.5-201ENST00000623665 376 ntBASIC2.64□□□□□ -1.99
RB1P06400 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RB1P06400 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RB1P06400 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RB1P06400 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RB1P06400 Y_RNA.89-201ENST00000363031 102 ntBASIC2.63□□□□□ -1.99
RB1P06400 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
RB1P06400 SNORD114-30-201ENST00000364448 72 ntBASIC2.63□□□□□ -1.99
RB1P06400 Y_RNA.256-201ENST00000364594 104 ntBASIC2.63□□□□□ -1.99
RB1P06400 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.63□□□□□ -1.99
RB1P06400 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.63□□□□□ -1.99
RB1P06400 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.63□□□□□ -1.99
RB1P06400 SRIP2-201ENST00000428470 166 ntBASIC2.63□□□□□ -1.99
RB1P06400 AL591806.2-201ENST00000433122 173 ntBASIC2.63□□□□□ -1.99
RB1P06400 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RB1P06400 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.63□□□□□ -1.99
RB1P06400 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.63□□□□□ -1.99
RB1P06400 IFNA11P-201ENST00000446352 526 ntBASIC2.63□□□□□ -1.99
RB1P06400 HMGN2P26-201ENST00000463169 339 ntBASIC2.63□□□□□ -1.99
RB1P06400 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.63□□□□□ -1.99
RB1P06400 AC108210.2-201ENST00000503681 201 ntBASIC2.63□□□□□ -1.99
RB1P06400 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.63□□□□□ -1.99
RB1P06400 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.63□□□□□ -1.99
RB1P06400 AC105137.2-201ENST00000569073 466 ntBASIC2.63□□□□□ -1.99
RB1P06400 RMST_3.1-201ENST00000611651 109 ntBASIC2.63□□□□□ -1.99
RB1P06400 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
RB1P06400 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.63□□□□□ -1.99
RB1P06400 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
RB1P06400 AC121333.1-201ENST00000567488 2709 ntBASIC2.63□□□□□ -1.99
RB1P06400 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.63□□□□□ -1.99
RB1P06400 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RB1P06400 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.62□□□□□ -1.99
RB1P06400 RNU6-428P-201ENST00000362942 107 ntBASIC2.62□□□□□ -1.99
RB1P06400 RNU6-534P-201ENST00000364877 106 ntBASIC2.62□□□□□ -1.99
RB1P06400 RNU6-877P-201ENST00000383868 107 ntBASIC2.62□□□□□ -1.99
RB1P06400 RNU1-57P-201ENST00000384491 166 ntBASIC2.62□□□□□ -1.99
RB1P06400 EIF4E2P1-201ENST00000393781 255 ntBASIC2.62□□□□□ -1.99
RB1P06400 RNU2-23P-201ENST00000410545 195 ntBASIC2.62□□□□□ -1.99
RB1P06400 EIF1P1-201ENST00000421436 341 ntBASIC2.62□□□□□ -1.99
RB1P06400 EIF4EP4-201ENST00000424916 578 ntBASIC2.62□□□□□ -1.99
RB1P06400 AC007969.2-201ENST00000441891 191 ntBASIC2.62□□□□□ -1.99
RB1P06400 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.62□□□□□ -1.99
RB1P06400 RNU6-718P-201ENST00000516166 105 ntBASIC2.62□□□□□ -1.99
RB1P06400 AC109329.1-201ENST00000518744 317 ntBASIC2.62□□□□□ -1.99
RB1P06400 AC021269.2-201ENST00000532318 330 ntBASIC2.62□□□□□ -1.99
RB1P06400 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RB1P06400 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
RB1P06400 AC024614.3-201ENST00000637860 256 ntBASIC2.62□□□□□ -1.99
RB1P06400 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.62□□□□□ -1.99
RB1P06400 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RB1P06400 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RB1P06400 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.61□□□□□ -1.99
RB1P06400 SNORD114-1-201ENST00000362705 72 ntBASIC2.61□□□□□ -1.99
RB1P06400 RNU1-72P-201ENST00000362976 153 ntBASIC2.61□□□□□ -1.99
RB1P06400 SNORA38-201ENST00000363946 132 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms