Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU6-898P-201ENST00000365627 104 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 SNORD116-11-201ENST00000383882 92 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 Y_RNA.474-201ENST00000384341 102 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 MIR181A2-201ENST00000384863 110 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN1O95832 MIR548K-201ENST00000408406 116 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 PGBD4P6-201ENST00000421501 610 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN1O95832 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN1O95832 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN1O95832 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN1O95832 AC008526.1-201ENST00000509149 338 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AC113155.1-201ENST00000511141 769 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AP004607.1-201ENST00000524456 203 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
CLDN1O95832 RAB11AP2-201ENST00000545905 639 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.38□□□□□ -2.03
CLDN1O95832 MTCO3P13-201ENST00000577757 781 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 RNU6-85P-201ENST00000605989 107 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AL132765.2-201ENST00000610812 351 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 Y_RNA.804-201ENST00000615262 101 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AC104985.2-201ENST00000620598 500 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 AC138627.2-201ENST00000624202 601 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLDN1O95832 ZNF72P-201ENST00000425869 1908 ntBASIC2.38□□□□□ -2.03
CLDN1O95832 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN1O95832 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN1O95832 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN1O95832 RNU6-1329P-201ENST00000365664 107 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN1O95832 RNU1-109P-201ENST00000383960 147 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 MT-TD-201ENST00000387419 68 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 FO393413.1-201ENST00000402892 195 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 RN7SKP223-201ENST00000410582 62 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 UBE2V1P4-201ENST00000425374 344 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 HMGN2P3-201ENST00000433603 273 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 RPS15AP5-201ENST00000436276 388 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 HMGN2P5-201ENST00000436882 273 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AL513043.1-201ENST00000439124 535 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 BTF3P15-201ENST00000455606 336 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 PPP1R2P5-201ENST00000457256 603 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AC008571.1-201ENST00000467232 300 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 RPL23AP45-201ENST00000476406 468 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 RNU6-566P-201ENST00000516790 107 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 SNORD19.2-201ENST00000516978 73 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 RNA5SP454-201ENST00000517231 127 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AP005639.2-201ENST00000527592 928 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AC025423.5-201ENST00000550230 219 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 OR1M4P-201ENST00000589199 287 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN1O95832 C8orf59P2-201ENST00000603441 271 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AC004852.3-201ENST00000614131 326 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AL161629.2-201ENST00000615347 275 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AC063943.3-201ENST00000615562 356 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AL359697.1-201ENST00000624879 587 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 AC110079.1-202ENST00000635213 138 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 MIR6733-201ENST00000635723 61 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 U4.7-201ENST00000638126 106 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN1O95832 AC138915.1-201ENST00000565427 1685 ntBASIC2.37□□□□□ -2.03
CLDN1O95832 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN1O95832 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN1O95832 AP006437.1-201ENST00000641440 3685 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN1O95832 RNU6-78P-201ENST00000362897 107 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 RN7SKP158-201ENST00000410453 326 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 AC096649.2-201ENST00000416186 393 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 SNAP23P1-201ENST00000433229 246 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 RPS29P6-201ENST00000438196 145 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 HIGD1AP2-201ENST00000446367 280 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 MTND5P5-201ENST00000503764 376 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN1O95832 MTCYBP40-201ENST00000509390 1135 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 MTND3P22-201ENST00000510932 243 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN1O95832 RNU6-277P-201ENST00000516272 106 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 AC109479.2-201ENST00000517842 174 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN1O95832 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN1O95832 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CLDN1O95832 AC008739.2-201ENST00000597006 317 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 RPL23AP78-201ENST00000599928 470 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 AC008121.1-201ENST00000603244 268 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 ELOCP5-201ENST00000604924 333 ntBASIC2.36□□□□□ -2.03
CLDN1O95832 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CLDN1O95832 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN1O95832 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CLDN1O95832 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN1O95832 RNU6-37P-201ENST00000362692 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-562P-201ENST00000362731 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 VTRNA1-1-201ENST00000363120 99 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 Y_RNA.164-201ENST00000363709 102 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-11P-201ENST00000364234 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-25P-201ENST00000383873 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-1-201ENST00000383898 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-214P-201ENST00000384130 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-48P-201ENST00000384161 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms