Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CYP2C59P-201ENST00000457790 269 ntBASIC2.73□□□□□ -1.97
RTN3O95197 CKS1BP2-201ENST00000497342 240 ntBASIC2.73□□□□□ -1.97
RTN3O95197 RPS27P27-201ENST00000498779 255 ntBASIC2.73□□□□□ -1.97
RTN3O95197 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.73□□□□□ -1.97
RTN3O95197 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.73□□□□□ -1.97
RTN3O95197 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.73□□□□□ -1.97
RTN3O95197 AL133241.1-201ENST00000556832 487 ntBASIC2.73□□□□□ -1.97
RTN3O95197 RPL30P11-203ENST00000598995 310 ntBASIC2.73□□□□□ -1.97
RTN3O95197 AL138963.2-201ENST00000605137 226 ntBASIC2.73□□□□□ -1.97
RTN3O95197 AL357078.3-201ENST00000607528 618 ntBASIC2.73□□□□□ -1.97
RTN3O95197 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RTN3O95197 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.73□□□□□ -1.97
RTN3O95197 AC009233.1-201ENST00000616477 371 ntBASIC2.73□□□□□ -1.97
RTN3O95197 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTN3O95197 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.73□□□□□ -1.97
RTN3O95197 Y_RNA.167-201ENST00000363735 109 ntBASIC2.72□□□□□ -1.97
RTN3O95197 RNU6-1210P-201ENST00000363775 107 ntBASIC2.72□□□□□ -1.97
RTN3O95197 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RTN3O95197 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RTN3O95197 RNU6-1222P-201ENST00000384615 107 ntBASIC2.72□□□□□ -1.97
RTN3O95197 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.72□□□□□ -1.97
RTN3O95197 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.72□□□□□ -1.97
RTN3O95197 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.72□□□□□ -1.97
RTN3O95197 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.72□□□□□ -1.97
RTN3O95197 AC243964.1-201ENST00000441814 261 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.72□□□□□ -1.97
RTN3O95197 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.72□□□□□ -1.97
RTN3O95197 RPS3P1-201ENST00000456781 192 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AL121594.1-201ENST00000475906 575 ntBASIC2.72□□□□□ -1.97
RTN3O95197 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.72□□□□□ -1.97
RTN3O95197 AF213884.2-201ENST00000510417 903 ntBASIC2.72□□□□□ -1.97
RTN3O95197 RNU6-323P-201ENST00000521915 107 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AC243972.3-201ENST00000539655 198 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AC103996.1-201ENST00000555468 102 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.72□□□□□ -1.97
RTN3O95197 MYL12BP1-201ENST00000569826 507 ntBASIC2.72□□□□□ -1.97
RTN3O95197 MIR5692C1-201ENST00000585309 91 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AC091135.1-201ENST00000585943 307 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AL713866.2-201ENST00000603579 219 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AC080078.2-201ENST00000603766 501 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AL121757.2-201ENST00000611223 313 ntBASIC2.72□□□□□ -1.97
RTN3O95197 Z82195.2-201ENST00000612348 18351 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AC090517.2-201ENST00000614966 680 ntBASIC2.72□□□□□ -1.97
RTN3O95197 AL159153.1-201ENST00000619688 317 ntBASIC2.72□□□□□ -1.97
RTN3O95197 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.72□□□□□ -1.97
RTN3O95197 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RTN3O95197 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.72□□□□□ -1.97
RTN3O95197 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
RTN3O95197 Y_RNA.40-201ENST00000362645 93 ntBASIC2.71□□□□□ -1.98
RTN3O95197 Y_RNA.89-201ENST00000363031 102 ntBASIC2.71□□□□□ -1.98
RTN3O95197 Y_RNA.256-201ENST00000364594 104 ntBASIC2.71□□□□□ -1.98
RTN3O95197 RNU6-877P-201ENST00000383868 107 ntBASIC2.71□□□□□ -1.98
RTN3O95197 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN3O95197 USP9YP20-201ENST00000419224 558 ntBASIC2.71□□□□□ -1.98
RTN3O95197 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN3O95197 RPS15AP10-201ENST00000432472 382 ntBASIC2.71□□□□□ -1.98
RTN3O95197 UBE2V1P8-201ENST00000437166 265 ntBASIC2.71□□□□□ -1.98
RTN3O95197 AC090515.1-201ENST00000465295 476 ntBASIC2.71□□□□□ -1.98
RTN3O95197 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN3O95197 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
RTN3O95197 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.71□□□□□ -1.98
RTN3O95197 MIR4658-201ENST00000584344 65 ntBASIC2.71□□□□□ -1.98
RTN3O95197 AC107304.1-201ENST00000604229 296 ntBASIC2.71□□□□□ -1.98
RTN3O95197 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
RTN3O95197 AC008121.3-201ENST00000618726 433 ntBASIC2.71□□□□□ -1.98
RTN3O95197 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN3O95197 IGHVIII-44-202ENST00000636235 289 ntBASIC2.71□□□□□ -1.98
RTN3O95197 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RTN3O95197 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN3O95197 AC027514.1-201ENST00000588561 1603 ntBASIC2.71□□□□□ -1.98
RTN3O95197 U3.12-201ENST00000364498 214 ntBASIC2.7□□□□□ -1.98
RTN3O95197 Y_RNA.453-201ENST00000384223 109 ntBASIC2.7□□□□□ -1.98
RTN3O95197 MIR27B-201ENST00000385129 97 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AL445529.1-201ENST00000398713 389 ntBASIC2.7□□□□□ -1.98
RTN3O95197 MIR548F1-201ENST00000408667 84 ntBASIC2.7□□□□□ -1.98
RTN3O95197 RNU6-373P-201ENST00000411247 98 ntBASIC2.7□□□□□ -1.98
RTN3O95197 FCF1P9-201ENST00000412546 282 ntBASIC2.7□□□□□ -1.98
RTN3O95197 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.7□□□□□ -1.98
RTN3O95197 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
RTN3O95197 MTCO2P3-201ENST00000442543 421 ntBASIC2.7□□□□□ -1.98
RTN3O95197 MRPL50P4-201ENST00000446432 475 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN3O95197 HMGN2P26-201ENST00000463169 339 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC083904.1-201ENST00000487828 231 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.7□□□□□ -1.98
RTN3O95197 AC107222.1-201ENST00000510899 637 ntBASIC2.7□□□□□ -1.98
RTN3O95197 Y_RNA.665-201ENST00000516177 98 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.7□□□□□ -1.98
RTN3O95197 AC093249.1-201ENST00000567049 203 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
RTN3O95197 BNIP3P25-201ENST00000596023 559 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
RTN3O95197 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN3O95197 MIR3688-2-201ENST00000636963 87 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC024614.3-201ENST00000637860 256 ntBASIC2.7□□□□□ -1.98
RTN3O95197 AC241585.2-209ENST00000638217 143 ntBASIC2.7□□□□□ -1.98
RTN3O95197 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.7□□□□□ -1.98
RTN3O95197 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN3O95197 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms