Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RNU6-937P-201ENST00000384325 106 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 RNU6-102P-201ENST00000384485 104 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 SNORD78.2-201ENST00000391076 69 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 AL591043.1-201ENST00000432461 424 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 MTND2P29-201ENST00000438595 412 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAF4O95104 AC124916.1-201ENST00000444020 547 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 AP000870.1-201ENST00000472927 406 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 RPS27AP10-201ENST00000496103 208 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 CR383656.8-201ENST00000549046 145 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 AC022655.2-201ENST00000577280 318 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 Y_RNA.772-201ENST00000606692 102 ntBASIC3.21□□□□□ -1.9
SCAF4O95104 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCAF4O95104 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAF4O95104 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SCAF4O95104 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAF4O95104 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAF4O95104 Y_RNA.117-201ENST00000363294 101 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 RNU6-1062P-201ENST00000383908 107 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 SNORA29-201ENST00000384183 140 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 MIR32-201ENST00000384965 70 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 RNU1-139P-201ENST00000391307 165 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 FTH1P15-201ENST00000406984 280 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 AC074117.2-201ENST00000417130 397 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAF4O95104 EIF1AXP1-201ENST00000419267 435 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAF4O95104 COX6B1P7-201ENST00000430845 235 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 MTND5P15-201ENST00000434246 349 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAF4O95104 AC016700.2-201ENST00000446011 156 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.2□□□□□ -1.9
SCAF4O95104 RPL37P4-201ENST00000448908 268 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 AC087477.1-201ENST00000465747 340 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 RPS29P20-201ENST00000489592 171 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 RN7SL604P-201ENST00000492589 296 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 AC097462.2-201ENST00000504623 481 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF4O95104 RNU6-496P-201ENST00000516145 99 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 RN7SKP83-201ENST00000516512 178 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.2□□□□□ -1.9
SCAF4O95104 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 MIR3653-201ENST00000625572 110 ntBASIC3.2□□□□□ -1.9
SCAF4O95104 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAF4O95104 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAF4O95104 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAF4O95104 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAF4O95104 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAF4O95104 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
SCAF4O95104 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SCAF4O95104 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCAF4O95104 SNORD56.1-201ENST00000362913 68 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 SNORD113-8-201ENST00000363497 74 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 Y_RNA.274-201ENST00000364714 101 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 SNORA14A-201ENST00000364773 135 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 U8.10-201ENST00000384260 133 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF4O95104 AC002075.2-201ENST00000425207 252 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AL353705.1-201ENST00000433468 480 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF4O95104 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAF4O95104 AC006011.1-201ENST00000442758 349 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AC125238.1-201ENST00000448842 249 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AC091167.1-201ENST00000492017 396 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAF4O95104 RN7SKP122-201ENST00000515923 296 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 SNORA31.23-201ENST00000517219 133 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 MRPL49P2-201ENST00000521066 465 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAF4O95104 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF4O95104 CYCSP29-201ENST00000533731 318 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
SCAF4O95104 MIR4643-201ENST00000577473 78 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 MIR92B-201ENST00000607575 96 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 MIR6716-201ENST00000613413 80 ntBASIC3.19□□□□□ -1.9
SCAF4O95104 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAF4O95104 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCAF4O95104 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAF4O95104 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF4O95104 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCAF4O95104 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.18□□□□□ -1.9
SCAF4O95104 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SCAF4O95104 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SCAF4O95104 Y_RNA.277-201ENST00000364754 102 ntBASIC3.18□□□□□ -1.9
SCAF4O95104 MIR487A-201ENST00000385009 80 ntBASIC3.18□□□□□ -1.9
SCAF4O95104 MIR153-2-201ENST00000385225 87 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms