Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA3O60609 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA3O60609 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA3O60609 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
GFRA3O60609 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA3O60609 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
GFRA3O60609 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA3O60609 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
GFRA3O60609 Y_RNA.10-201ENST00000362371 110 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 SNORD116-13-201ENST00000384408 92 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 OR2AH1P-201ENST00000425717 928 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 TOMM22P2-201ENST00000430735 237 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 RPL23AP14-201ENST00000468281 468 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 RPS20P22-201ENST00000473700 357 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 SNRPCP3-201ENST00000474888 476 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 Y_RNA.659-201ENST00000515994 113 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 AC107294.3-201ENST00000609211 526 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 MIR6133-201ENST00000617057 108 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 AL022401.1-201ENST00000619498 108 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 AC007546.2-201ENST00000623996 360 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
GFRA3O60609 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA3O60609 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA3O60609 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA3O60609 AC005005.4-201ENST00000623789 16698 ntBASIC4.6□□□□□ -1.67
GFRA3O60609 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA3O60609 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA3O60609 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GFRA3O60609 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA3O60609 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
GFRA3O60609 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA3O60609 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA3O60609 AL356292.1-201ENST00000283110 373 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA3O60609 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA3O60609 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA3O60609 MIR759-201ENST00000390224 91 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
GFRA3O60609 AC007256.1-201ENST00000392253 2765 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA3O60609 Z98745.1-201ENST00000402553 494 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 MIR320B2-201ENST00000408479 138 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 AC004866.1-201ENST00000411748 78 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
GFRA3O60609 H2AFZP5-201ENST00000446960 382 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 RNU2-11P-201ENST00000459191 187 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 AC103975.1-201ENST00000482506 483 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 RN7SKP83-201ENST00000516512 178 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA3O60609 uc_338.4-201ENST00000616635 176 ntBASIC4.59□□□□□ -1.67
GFRA3O60609 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
GFRA3O60609 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
GFRA3O60609 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
GFRA3O60609 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
GFRA3O60609 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA3O60609 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
GFRA3O60609 Y_RNA.66-201ENST00000362862 102 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 RNU6-486P-201ENST00000363116 107 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 Y_RNA.545-201ENST00000384652 105 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GFRA3O60609 AL356095.1-201ENST00000417217 199 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 AC009238.2-201ENST00000431026 355 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.58□□□□□ -1.68
GFRA3O60609 AC004223.1-201ENST00000479840 271 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 RNU6-240P-201ENST00000516098 97 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 SNORA31.16-201ENST00000516773 139 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 RN7SKP209-201ENST00000516888 304 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 HMGN2P47-201ENST00000559378 272 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 RN7SL703P-201ENST00000578485 302 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 MIR3129-201ENST00000581095 76 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 AC091152.3-201ENST00000604227 325 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 MIR6867-201ENST00000610636 67 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 MIR8059-201ENST00000620427 81 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 SCARNA15.3-201ENST00000626315 122 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 SCARNA4.1-201ENST00000628597 123 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 AC068205.3-201ENST00000636385 468 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 U6.99-201ENST00000637524 83 ntBASIC4.58□□□□□ -1.68
GFRA3O60609 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA3O60609 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
GFRA3O60609 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
GFRA3O60609 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA3O60609 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA3O60609 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA3O60609 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.58□□□□□ -1.68
GFRA3O60609 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA3O60609 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA3O60609 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA3O60609 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA3O60609 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
GFRA3O60609 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA3O60609 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms