Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX3O60493 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX3O60493 MTND4P5-201ENST00000435821 1374 ntBASIC2.29□□□□□ -2.04
SNX3O60493 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNX3O60493 RNU6-254P-201ENST00000363377 107 ntBASIC2.29□□□□□ -2.04
SNX3O60493 AL445529.1-201ENST00000398713 389 ntBASIC2.29□□□□□ -2.04
SNX3O60493 RNU6-1245P-201ENST00000411130 106 ntBASIC2.29□□□□□ -2.04
SNX3O60493 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX3O60493 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX3O60493 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNX3O60493 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX3O60493 USP9YP8-201ENST00000441913 500 ntBASIC2.29□□□□□ -2.04
SNX3O60493 RNA5SP341-201ENST00000516261 117 ntBASIC2.29□□□□□ -2.04
SNX3O60493 RNU6-1332P-201ENST00000516666 104 ntBASIC2.29□□□□□ -2.04
SNX3O60493 PSMA3P-201ENST00000555485 635 ntBASIC2.29□□□□□ -2.04
SNX3O60493 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX3O60493 AC027176.1-201ENST00000560204 514 ntBASIC2.29□□□□□ -2.04
SNX3O60493 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
SNX3O60493 MIR4325-201ENST00000583049 90 ntBASIC2.29□□□□□ -2.04
SNX3O60493 MIR5195-201ENST00000583555 115 ntBASIC2.29□□□□□ -2.04
SNX3O60493 RPL30P11-203ENST00000598995 310 ntBASIC2.29□□□□□ -2.04
SNX3O60493 AL713866.2-201ENST00000603579 219 ntBASIC2.29□□□□□ -2.04
SNX3O60493 ELOCP5-201ENST00000604924 333 ntBASIC2.29□□□□□ -2.04
SNX3O60493 MIR92B-201ENST00000607575 96 ntBASIC2.29□□□□□ -2.04
SNX3O60493 AC096577.2-201ENST00000611455 153 ntBASIC2.29□□□□□ -2.04
SNX3O60493 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
SNX3O60493 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
SNX3O60493 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX3O60493 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
SNX3O60493 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX3O60493 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SNX3O60493 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNX3O60493 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNX3O60493 RNU6-1252P-201ENST00000363054 104 ntBASIC2.28□□□□□ -2.04
SNX3O60493 U3.13-201ENST00000364804 214 ntBASIC2.28□□□□□ -2.04
SNX3O60493 RNU6-1329P-201ENST00000365664 107 ntBASIC2.28□□□□□ -2.04
SNX3O60493 MIR450B-201ENST00000401182 78 ntBASIC2.28□□□□□ -2.04
SNX3O60493 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC003685.2-201ENST00000422795 395 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AIMP1P2-201ENST00000425294 312 ntBASIC2.28□□□□□ -2.04
SNX3O60493 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.28□□□□□ -2.04
SNX3O60493 NDUFA5P4-201ENST00000436704 385 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AL359672.1-201ENST00000442302 409 ntBASIC2.28□□□□□ -2.04
SNX3O60493 MTCO2P3-201ENST00000442543 421 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.28□□□□□ -2.04
SNX3O60493 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.28□□□□□ -2.04
SNX3O60493 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX3O60493 RNU7-66P-201ENST00000459469 62 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AL121594.1-201ENST00000475906 575 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC008628.2-201ENST00000502605 298 ntBASIC2.28□□□□□ -2.04
SNX3O60493 FAM206BP-201ENST00000510179 541 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC092436.3-201ENST00000511788 257 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX3O60493 RPL39P5-202ENST00000512505 151 ntBASIC2.28□□□□□ -2.04
SNX3O60493 RN7SKP24-201ENST00000515888 284 ntBASIC2.28□□□□□ -2.04
SNX3O60493 CBX3P7-201ENST00000532876 502 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.28□□□□□ -2.04
SNX3O60493 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC093249.1-201ENST00000567049 203 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX3O60493 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX3O60493 VN1R107P-201ENST00000601784 209 ntBASIC2.28□□□□□ -2.04
SNX3O60493 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
SNX3O60493 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.28□□□□□ -2.04
SNX3O60493 U6atac.1-201ENST00000616025 117 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC002553.4-201ENST00000616896 331 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC100810.6-201ENST00000638068 285 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC073346.2-201ENST00000624724 2058 ntBASIC2.28□□□□□ -2.04
SNX3O60493 AC002543.1-201ENST00000299783 1954 ntBASIC2.28□□□□□ -2.04
SNX3O60493 RNU6-655P-201ENST00000362858 107 ntBASIC2.27□□□□□ -2.05
SNX3O60493 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
SNX3O60493 RNU6-1222P-201ENST00000384615 107 ntBASIC2.27□□□□□ -2.05
SNX3O60493 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SNX3O60493 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX3O60493 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.27□□□□□ -2.05
SNX3O60493 CYCSP48-201ENST00000417124 323 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.27□□□□□ -2.05
SNX3O60493 AC236972.1-201ENST00000433225 199 ntBASIC2.27□□□□□ -2.05
SNX3O60493 SNAP23P1-201ENST00000433229 246 ntBASIC2.27□□□□□ -2.05
SNX3O60493 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX3O60493 NFU1P2-201ENST00000448700 469 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX3O60493 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
SNX3O60493 snoU13.14-201ENST00000459372 104 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AC007547.1-201ENST00000462177 490 ntBASIC2.27□□□□□ -2.05
SNX3O60493 SNRPGP7-201ENST00000469016 106 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AC069439.1-201ENST00000494739 167 ntBASIC2.27□□□□□ -2.05
SNX3O60493 RNA5SP320-201ENST00000516263 124 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.27□□□□□ -2.05
SNX3O60493 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.27□□□□□ -2.05
SNX3O60493 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX3O60493 AC091135.1-201ENST00000585943 307 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AC009314.1-201ENST00000603871 304 ntBASIC2.27□□□□□ -2.05
SNX3O60493 AL138963.2-201ENST00000605137 226 ntBASIC2.27□□□□□ -2.05
SNX3O60493 MIR5739-201ENST00000619803 80 ntBASIC2.27□□□□□ -2.05
SNX3O60493 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SNX3O60493 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNX3O60493 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms