Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SNX2P2-201ENST00000424553 323 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AL163195.1-201ENST00000496941 348 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.85□□□□□ -2.27
SSNA1O43805 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.85□□□□□ -2.27
SSNA1O43805 RNU7-51P-201ENST00000516560 62 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AC115990.1-201ENST00000526957 301 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 MTATP6P15-201ENST00000527233 835 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AC011979.2-201ENST00000527568 352 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AP002453.2-201ENST00000533503 320 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 ADI1P3-201ENST00000549509 470 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
SSNA1O43805 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.85□□□□□ -2.27
SSNA1O43805 NIFKP6-201ENST00000598115 845 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AL592221.1-201ENST00000605266 382 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 BX284668.6-201ENST00000606899 438 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 AP002360.4-201ENST00000606980 481 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SSNA1O43805 RNU6-968P-201ENST00000384076 107 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AL356776.1-201ENST00000406574 447 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.84□□□□□ -2.27
SSNA1O43805 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.84□□□□□ -2.27
SSNA1O43805 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.84□□□□□ -2.27
SSNA1O43805 AL591043.1-201ENST00000432461 424 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.84□□□□□ -2.27
SSNA1O43805 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.84□□□□□ -2.27
SSNA1O43805 ATP5J2P3-201ENST00000451550 258 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 SNORD13-201ENST00000459299 104 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AC093852.1-201ENST00000503587 266 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AC016550.1-201ENST00000505348 785 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 UBL5P1-201ENST00000507979 193 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.84□□□□□ -2.27
SSNA1O43805 AC079140.3-201ENST00000511111 550 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 MTND3P5-201ENST00000512798 333 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.84□□□□□ -2.27
SSNA1O43805 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 RN7SKP88-201ENST00000516847 250 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 RNU6-1003P-201ENST00000517099 105 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 RNU6-201P-201ENST00000517100 61 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.84□□□□□ -2.27
SSNA1O43805 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.84□□□□□ -2.27
SSNA1O43805 AC084364.2-201ENST00000546924 395 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 SNORA59B-202ENST00000578183 701 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AL139022.2-201ENST00000606934 443 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 BX323046.1-201ENST00000610145 535 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 7SK.8-201ENST00000612110 250 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 7SK.11-201ENST00000615477 250 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 7SK.13-201ENST00000622040 250 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 AL138955.1-201ENST00000622881 1040 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 SNORD98-201ENST00000636377 67 ntBASIC0.84□□□□□ -2.27
SSNA1O43805 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
SSNA1O43805 AL159152.1-201ENST00000635019 2587 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SSNA1O43805 RNU6-527P-201ENST00000363425 104 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 RNU6-1019P-201ENST00000364424 107 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 RNU5E-7P-201ENST00000365290 117 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 RNU6-438P-201ENST00000365561 103 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 SNORA32.2-201ENST00000384049 122 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SSNA1O43805 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SSNA1O43805 EEF1A1P40-201ENST00000412883 573 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 RPL21P90-201ENST00000415692 466 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 MTND3P1-201ENST00000441336 220 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 MTND5P2-201ENST00000442927 1142 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AL358794.1-201ENST00000445689 381 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.83□□□□□ -2.28
SSNA1O43805 RPS29P21-201ENST00000496272 170 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 MTND2P31-201ENST00000512602 616 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.83□□□□□ -2.28
SSNA1O43805 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.83□□□□□ -2.28
SSNA1O43805 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 RNU6-87P-201ENST00000607561 108 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AC010149.2-201ENST00000637608 315 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 AC103706.2-201ENST00000638080 240 ntBASIC0.83□□□□□ -2.28
SSNA1O43805 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SSNA1O43805 SNORA67.5-201ENST00000391036 107 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.82□□□□□ -2.28
SSNA1O43805 AC114491.1-201ENST00000416095 246 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 BTF3P4-201ENST00000418852 495 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.82□□□□□ -2.28
SSNA1O43805 MTND1P32-201ENST00000433043 938 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 MTND1P12-201ENST00000455231 147 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 snoU13.27-201ENST00000459278 104 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AP000797.1-201ENST00000478870 387 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC104806.1-201ENST00000508720 308 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC108078.2-201ENST00000510750 236 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 RNA5SP503-201ENST00000517047 117 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC022616.6-201ENST00000520479 119 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.82□□□□□ -2.28
SSNA1O43805 MIR3118-1-201ENST00000581787 76 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.82□□□□□ -2.28
SSNA1O43805 AC121334.2-201ENST00000605387 271 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SSNA1O43805 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC012676.2-201ENST00000619258 186 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms