Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 SNORA18.3-201ENST00000384122 132 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 SNORA36C-201ENST00000384289 132 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 RNU6-1109P-201ENST00000391187 107 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 FO393413.1-201ENST00000402892 195 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 RPL27AP8-201ENST00000424277 446 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC107083.1-201ENST00000439643 279 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC099799.1-201ENST00000439809 192 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC011816.1-201ENST00000441346 546 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC018437.1-201ENST00000492214 406 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC097462.2-201ENST00000504623 481 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC105758.1-201ENST00000506038 399 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC006445.2-201ENST00000510061 472 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 RNU6-475P-201ENST00000516073 104 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AC069113.1-201ENST00000517763 267 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SMAD6O43541 HSPE1P20-201ENST00000538133 289 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD6O43541 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD6O43541 CYCSP39-201ENST00000565821 309 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD6O43541 AL606534.2-204ENST00000635008 178 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SMAD6O43541 GABRG2-229ENST00000641017 3628 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SMAD6O43541 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD6O43541 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD6O43541 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD6O43541 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD6O43541 AC009310.1-201ENST00000414414 451 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 CYCSP33-201ENST00000414485 327 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 BX276092.3-201ENST00000424182 230 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AL133396.1-201ENST00000432048 687 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD6O43541 UQCRHP3-201ENST00000451503 251 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 PCMTD1P1-201ENST00000455560 355 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AC112492.4-201ENST00000456549 352 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AC008571.1-201ENST00000467232 300 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD6O43541 SUMO2P6-201ENST00000505273 288 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 Y_RNA.668-201ENST00000516233 93 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD6O43541 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD6O43541 HSBP1P1-201ENST00000555205 166 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 SUB1P3-201ENST00000564581 315 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 LRRC37A5P-203ENST00000580181 585 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 MIR548AC-201ENST00000585049 88 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.95□□□□□ -1.94
SMAD6O43541 AC100812.1-201ENST00000607622 580 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AC107871.2-201ENST00000612894 502 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 AC009812.4-201ENST00000569134 1805 ntBASIC2.95□□□□□ -1.94
SMAD6O43541 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD6O43541 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD6O43541 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD6O43541 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD6O43541 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
SMAD6O43541 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
SMAD6O43541 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMAD6O43541 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD6O43541 Y_RNA.48-201ENST00000362710 103 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 Y_RNA.106-201ENST00000363189 100 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 Y_RNA.314-201ENST00000365114 102 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 Y_RNA.424-201ENST00000384063 103 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 Y_RNA.556-201ENST00000384677 113 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMAD6O43541 AL445529.1-201ENST00000398713 389 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 RNU6-607P-201ENST00000411283 108 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD6O43541 AL592045.1-201ENST00000429867 352 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AL353997.1-201ENST00000432936 108 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD6O43541 NDUFB4P6-201ENST00000436819 366 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 Z98949.2-201ENST00000440996 144 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD6O43541 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.94□□□□□ -1.94
SMAD6O43541 CHEK2P4-201ENST00000450340 246 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 PCNPP5-201ENST00000452246 481 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AC092798.1-201ENST00000458542 409 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.94□□□□□ -1.94
SMAD6O43541 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMAD6O43541 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 OR1M4P-201ENST00000589199 287 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD6O43541 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AL355297.3-201ENST00000604082 446 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD6O43541 U2.1-201ENST00000618978 145 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.94□□□□□ -1.94
SMAD6O43541 AL365361.1-201ENST00000566942 3481 ntBASIC2.94□□□□□ -1.94
SMAD6O43541 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.94□□□□□ -1.94
SMAD6O43541 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.94□□□□□ -1.94
SMAD6O43541 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.94□□□□□ -1.94
SMAD6O43541 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMAD6O43541 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMAD6O43541 ZNF72P-201ENST00000425869 1908 ntBASIC2.93□□□□□ -1.94
SMAD6O43541 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
SMAD6O43541 AC026241.1-201ENST00000517873 2142 ntBASIC2.93□□□□□ -1.94
SMAD6O43541 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms