Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
CDX4O14627 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDX4O14627 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CDX4O14627 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX4O14627 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.14□□□□□ -2.07
CDX4O14627 AL513475.1-201ENST00000406602 315 ntBASIC2.14□□□□□ -2.07
CDX4O14627 MIR1287-201ENST00000408492 90 ntBASIC2.14□□□□□ -2.07
CDX4O14627 RNA5SP118-201ENST00000410385 109 ntBASIC2.14□□□□□ -2.07
CDX4O14627 RNU6-1140P-201ENST00000410517 106 ntBASIC2.14□□□□□ -2.07
CDX4O14627 RNU6-1148P-201ENST00000410992 104 ntBASIC2.14□□□□□ -2.07
CDX4O14627 RNU6-373P-201ENST00000411247 98 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX4O14627 AL627311.1-201ENST00000431514 115 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX4O14627 AC098614.3-201ENST00000438957 440 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AL161651.1-201ENST00000440882 223 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX4O14627 NDUFB1P2-201ENST00000449477 176 ntBASIC2.14□□□□□ -2.07
CDX4O14627 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX4O14627 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.14□□□□□ -2.07
CDX4O14627 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX4O14627 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.14□□□□□ -2.07
CDX4O14627 CCDC34P1-201ENST00000507441 517 ntBASIC2.14□□□□□ -2.07
CDX4O14627 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX4O14627 RNA5SP76-201ENST00000516277 87 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AL121821.2-201ENST00000556081 394 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AL118558.2-201ENST00000556294 238 ntBASIC2.14□□□□□ -2.07
CDX4O14627 MIR3117-201ENST00000584034 78 ntBASIC2.14□□□□□ -2.07
CDX4O14627 MIR4781-201ENST00000585250 76 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AC023043.2-201ENST00000589678 1026 ntBASIC2.14□□□□□ -2.07
CDX4O14627 AP000787.2-201ENST00000604432 568 ntBASIC2.14□□□□□ -2.07
CDX4O14627 LARP7P1-201ENST00000605576 316 ntBASIC2.14□□□□□ -2.07
CDX4O14627 RNU6-89P-201ENST00000606519 100 ntBASIC2.14□□□□□ -2.07
CDX4O14627 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX4O14627 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDX4O14627 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDX4O14627 MTND4P14-201ENST00000435799 1354 ntBASIC2.13□□□□□ -2.07
CDX4O14627 MTND4P12-201ENST00000498999 1377 ntBASIC2.13□□□□□ -2.07
CDX4O14627 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CDX4O14627 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
CDX4O14627 VTRNA1-1-201ENST00000363120 99 ntBASIC2.13□□□□□ -2.07
CDX4O14627 Y_RNA.231-201ENST00000364358 102 ntBASIC2.13□□□□□ -2.07
CDX4O14627 SNORA68.1-201ENST00000364537 132 ntBASIC2.13□□□□□ -2.07
CDX4O14627 Y_RNA.279-201ENST00000364763 95 ntBASIC2.13□□□□□ -2.07
CDX4O14627 RNU6-1083P-201ENST00000384022 107 ntBASIC2.13□□□□□ -2.07
CDX4O14627 SNORA32.2-201ENST00000384049 122 ntBASIC2.13□□□□□ -2.07
CDX4O14627 RNU6-19P-201ENST00000384718 107 ntBASIC2.13□□□□□ -2.07
CDX4O14627 MIR514A2-201ENST00000385131 88 ntBASIC2.13□□□□□ -2.07
CDX4O14627 MIR514A3-201ENST00000385132 88 ntBASIC2.13□□□□□ -2.07
CDX4O14627 RNU2-2P-201ENST00000410396 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 HMGN2P35-201ENST00000412164 270 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX4O14627 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX4O14627 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.13□□□□□ -2.07
CDX4O14627 GSTA11P-201ENST00000452866 669 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AL583843.1-201ENST00000456070 346 ntBASIC2.13□□□□□ -2.07
CDX4O14627 HMGN2P26-201ENST00000463169 339 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC046134.1-201ENST00000514454 666 ntBASIC2.13□□□□□ -2.07
CDX4O14627 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
CDX4O14627 RNU6-875P-201ENST00000516488 106 ntBASIC2.13□□□□□ -2.07
CDX4O14627 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
CDX4O14627 SCARNA11.3-201ENST00000517276 130 ntBASIC2.13□□□□□ -2.07
CDX4O14627 MTND4P7-201ENST00000523876 130 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC078814.3-201ENST00000553036 491 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC018638.8-201ENST00000588755 281 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC011712.1-201ENST00000588959 234 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC023043.3-201ENST00000593113 385 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AL391813.1-201ENST00000603098 260 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC087045.1-201ENST00000605856 382 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.15-201ENST00000611544 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.16-201ENST00000613119 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.12-201ENST00000613778 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.20-201ENST00000613956 192 ntBASIC2.13□□□□□ -2.07
CDX4O14627 Y_RNA.804-201ENST00000615262 101 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.9-201ENST00000615427 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.11-201ENST00000616345 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.2-201ENST00000616535 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 uc_338.34-201ENST00000617467 174 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.3-201ENST00000617785 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.19-201ENST00000618602 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 RNU2-1-201ENST00000618664 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.6-201ENST00000619225 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 AC010378.1-201ENST00000619270 362 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.5-201ENST00000619465 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 U2.10-201ENST00000620268 191 ntBASIC2.13□□□□□ -2.07
CDX4O14627 MIR7515-201ENST00000637837 67 ntBASIC2.13□□□□□ -2.07
CDX4O14627 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX4O14627 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX4O14627 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.12□□□□□ -2.07
CDX4O14627 CBX3P1-201ENST00000325243 554 ntBASIC2.12□□□□□ -2.07
CDX4O14627 Y_RNA.157-201ENST00000363638 102 ntBASIC2.12□□□□□ -2.07
CDX4O14627 RNU6-1280P-201ENST00000365211 107 ntBASIC2.12□□□□□ -2.07
CDX4O14627 Y_RNA.373-201ENST00000365600 103 ntBASIC2.12□□□□□ -2.07
CDX4O14627 Y_RNA.378-201ENST00000365652 113 ntBASIC2.12□□□□□ -2.07
CDX4O14627 RNU6-166P-201ENST00000384371 107 ntBASIC2.12□□□□□ -2.07
CDX4O14627 RNU6-1179P-201ENST00000384667 107 ntBASIC2.12□□□□□ -2.07
CDX4O14627 MIR147B-201ENST00000390185 80 ntBASIC2.12□□□□□ -2.07
CDX4O14627 Y_RNA.623-201ENST00000411128 95 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
CDX4O14627 AL513185.2-201ENST00000425543 193 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms