Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 snoU13.23-201ENST00000458863 104 ntBASIC2.24□□□□□ -2.05
E2F3O00716 snoU109.2-201ENST00000459316 135 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.24□□□□□ -2.05
E2F3O00716 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.24□□□□□ -2.05
E2F3O00716 MTCO3P9-201ENST00000506989 781 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AC074344.1-201ENST00000512823 224 ntBASIC2.24□□□□□ -2.05
E2F3O00716 SEPT14P4-201ENST00000513445 186 ntBASIC2.24□□□□□ -2.05
E2F3O00716 RNU6-718P-201ENST00000516166 105 ntBASIC2.24□□□□□ -2.05
E2F3O00716 FO082796.1-201ENST00000523795 183 ntBASIC2.24□□□□□ -2.05
E2F3O00716 MTND1P35-201ENST00000526739 508 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AC118273.2-201ENST00000532092 465 ntBASIC2.24□□□□□ -2.05
E2F3O00716 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.24□□□□□ -2.05
E2F3O00716 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.24□□□□□ -2.05
E2F3O00716 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.24□□□□□ -2.05
E2F3O00716 BNIP3P30-201ENST00000601184 574 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AL355297.2-201ENST00000604792 129 ntBASIC2.24□□□□□ -2.05
E2F3O00716 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.24□□□□□ -2.05
E2F3O00716 uc_338.34-201ENST00000617467 174 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.24□□□□□ -2.05
E2F3O00716 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.24□□□□□ -2.05
E2F3O00716 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.24□□□□□ -2.05
E2F3O00716 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
E2F3O00716 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.23□□□□□ -2.05
E2F3O00716 RNU1-72P-201ENST00000362976 153 ntBASIC2.23□□□□□ -2.05
E2F3O00716 RNU4-66P-201ENST00000365199 138 ntBASIC2.23□□□□□ -2.05
E2F3O00716 Y_RNA.505-201ENST00000384489 102 ntBASIC2.23□□□□□ -2.05
E2F3O00716 RNU6-1127P-201ENST00000384580 107 ntBASIC2.23□□□□□ -2.05
E2F3O00716 MIR764-201ENST00000390811 85 ntBASIC2.23□□□□□ -2.05
E2F3O00716 Y_RNA.599-201ENST00000410489 109 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.23□□□□□ -2.05
E2F3O00716 PRPS1P1-201ENST00000445305 876 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.23□□□□□ -2.05
E2F3O00716 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.23□□□□□ -2.05
E2F3O00716 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.23□□□□□ -2.05
E2F3O00716 RNU6-835P-201ENST00000516974 104 ntBASIC2.23□□□□□ -2.05
E2F3O00716 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AP003033.1-201ENST00000527244 415 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.23□□□□□ -2.05
E2F3O00716 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.23□□□□□ -2.05
E2F3O00716 AL157687.1-201ENST00000554853 619 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AC073539.2-201ENST00000597113 165 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.23□□□□□ -2.05
E2F3O00716 AL670379.10-201ENST00000604330 253 ntBASIC2.23□□□□□ -2.05
E2F3O00716 AL670379.9-201ENST00000605428 253 ntBASIC2.23□□□□□ -2.05
E2F3O00716 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
E2F3O00716 AC090517.2-201ENST00000614966 680 ntBASIC2.23□□□□□ -2.05
E2F3O00716 YWHAEP7-203ENST00000622054 312 ntBASIC2.23□□□□□ -2.05
E2F3O00716 MIR1321-201ENST00000637766 79 ntBASIC2.23□□□□□ -2.05
E2F3O00716 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
E2F3O00716 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.22□□□□□ -2.05
E2F3O00716 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
E2F3O00716 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
E2F3O00716 Y_RNA.453-201ENST00000384223 109 ntBASIC2.22□□□□□ -2.05
E2F3O00716 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
E2F3O00716 SNORD115-47-201ENST00000391226 86 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AC016831.2-201ENST00000417179 352 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AL669831.1-202ENST00000428504 417 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.22□□□□□ -2.05
E2F3O00716 MTND1P4-201ENST00000435196 415 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AL121601.2-201ENST00000438019 707 ntBASIC2.22□□□□□ -2.05
E2F3O00716 GTF2IP13-201ENST00000438487 386 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.22□□□□□ -2.05
E2F3O00716 NDUFB1P2-201ENST00000449477 176 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AL353705.4-201ENST00000449661 238 ntBASIC2.22□□□□□ -2.05
E2F3O00716 CYP2C59P-201ENST00000457790 269 ntBASIC2.22□□□□□ -2.05
E2F3O00716 RNU7-180P-201ENST00000459240 63 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AC117503.1-201ENST00000472241 394 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AC092989.1-201ENST00000481235 277 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.22□□□□□ -2.05
E2F3O00716 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.22□□□□□ -2.05
E2F3O00716 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.22□□□□□ -2.05
E2F3O00716 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.22□□□□□ -2.05
E2F3O00716 AC109635.3-201ENST00000529536 185 ntBASIC2.22□□□□□ -2.05
E2F3O00716 MIR1273D-201ENST00000577266 86 ntBASIC2.22□□□□□ -2.05
E2F3O00716 MIR5583-1-201ENST00000580941 59 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AC087045.1-201ENST00000605856 382 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
E2F3O00716 RNU6-91P-201ENST00000607774 107 ntBASIC2.22□□□□□ -2.05
E2F3O00716 Z82243.1-201ENST00000609432 473 ntBASIC2.22□□□□□ -2.05
E2F3O00716 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
E2F3O00716 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
E2F3O00716 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
E2F3O00716 AC138393.1-203ENST00000327086 343 ntBASIC2.21□□□□□ -2.06
E2F3O00716 RNU6-858P-201ENST00000362436 107 ntBASIC2.21□□□□□ -2.06
E2F3O00716 Y_RNA.38-201ENST00000362617 102 ntBASIC2.21□□□□□ -2.06
E2F3O00716 RNY4P14-201ENST00000363656 96 ntBASIC2.21□□□□□ -2.06
E2F3O00716 RNA5SP240-201ENST00000365355 128 ntBASIC2.21□□□□□ -2.06
E2F3O00716 Y_RNA.450-201ENST00000384198 113 ntBASIC2.21□□□□□ -2.06
E2F3O00716 Y_RNA.573-201ENST00000384763 105 ntBASIC2.21□□□□□ -2.06
E2F3O00716 BTF3P7-201ENST00000407097 488 ntBASIC2.21□□□□□ -2.06
E2F3O00716 MIR1289-2-201ENST00000408360 111 ntBASIC2.21□□□□□ -2.06
E2F3O00716 RNU4-26P-201ENST00000410270 107 ntBASIC2.21□□□□□ -2.06
E2F3O00716 RNU6-1068P-201ENST00000410958 103 ntBASIC2.21□□□□□ -2.06
E2F3O00716 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.21□□□□□ -2.06
E2F3O00716 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
E2F3O00716 USP9YP18-201ENST00000425912 695 ntBASIC2.21□□□□□ -2.06
E2F3O00716 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.21□□□□□ -2.06
E2F3O00716 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.21□□□□□ -2.06
E2F3O00716 AL031659.1-201ENST00000447075 539 ntBASIC2.21□□□□□ -2.06
E2F3O00716 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms