Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RMST_4.1-201ENST00000616886 107 ntBASIC1.57□□□□□ -2.16
AP3B1O00203 AC022960.3-201ENST00000619794 441 ntBASIC1.57□□□□□ -2.16
AP3B1O00203 LINC02555-201ENST00000563933 1951 ntBASIC1.57□□□□□ -2.16
AP3B1O00203 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
AP3B1O00203 RNU6-439P-201ENST00000384188 106 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 MIR544A-201ENST00000384855 91 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC068050.1-201ENST00000394891 380 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AL593851.1-201ENST00000426171 157 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 USP9YP12-201ENST00000450481 570 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 ZNF114P1-201ENST00000453500 292 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.56□□□□□ -2.16
AP3B1O00203 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 RNU1-131P-201ENST00000458943 161 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC087477.1-201ENST00000465747 340 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC022447.4-201ENST00000504053 364 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 HMGN1P13-201ENST00000505795 138 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC005741.1-201ENST00000511094 432 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 RNU5F-2P-201ENST00000516066 82 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 Y_RNA.672-201ENST00000516289 104 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.56□□□□□ -2.16
AP3B1O00203 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.56□□□□□ -2.16
AP3B1O00203 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
AP3B1O00203 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
AP3B1O00203 MTND4P23-201ENST00000447723 1363 ntBASIC1.56□□□□□ -2.16
AP3B1O00203 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP3B1O00203 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3B1O00203 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.55□□□□□ -2.16
AP3B1O00203 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.55□□□□□ -2.16
AP3B1O00203 RN7SL429P-201ENST00000479090 223 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 RN7SL489P-201ENST00000486185 223 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 RN7SL327P-201ENST00000488659 223 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3B1O00203 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3B1O00203 RNU6-685P-201ENST00000517088 95 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 RNU6-1220P-201ENST00000517126 108 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AP001893.2-201ENST00000526949 202 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AC087441.2-201ENST00000529141 262 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AP002453.2-201ENST00000533503 320 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AP000873.5-201ENST00000533906 236 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3B1O00203 RPL21P5-201ENST00000554662 472 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.55□□□□□ -2.16
AP3B1O00203 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 RN7SL853P-201ENST00000617250 223 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AL359740.1-201ENST00000624340 592 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AC019226.2-201ENST00000625973 424 ntBASIC1.55□□□□□ -2.16
AP3B1O00203 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3B1O00203 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
AP3B1O00203 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
AP3B1O00203 RNU5F-7P-201ENST00000363696 115 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 RNY1P12-201ENST00000364251 105 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 AC000111.3-201ENST00000433478 193 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3B1O00203 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3B1O00203 RAP1BP2-201ENST00000478270 544 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.54□□□□□ -2.16
AP3B1O00203 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3B1O00203 PRR13P7-201ENST00000605538 430 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 AL121992.2-201ENST00000606262 256 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 AC091304.9-201ENST00000612091 226 ntBASIC1.54□□□□□ -2.16
AP3B1O00203 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
AP3B1O00203 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
AP3B1O00203 Y_RNA.332-201ENST00000365271 113 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 AC011233.1-201ENST00000422812 283 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 MTATP6P16-201ENST00000434543 526 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 TAF9P1-201ENST00000445421 515 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 FTH1P25-201ENST00000447665 469 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
AP3B1O00203 TAF9P2-201ENST00000454958 515 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 AC130509.1-201ENST00000464158 433 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 MTND3P25-201ENST00000509243 135 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 AC116337.1-201ENST00000509680 687 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 SCARNA24.1-201ENST00000516465 137 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.53□□□□□ -2.16
AP3B1O00203 MIR3908-201ENST00000579798 126 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 MIR3136-201ENST00000583498 78 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 AC005771.1-201ENST00000585581 349 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
AP3B1O00203 AC073539.2-201ENST00000597113 165 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 AC011458.1-201ENST00000604034 617 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 AL034555.1-201ENST00000604816 211 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.53□□□□□ -2.16
AP3B1O00203 AC131159.1-201ENST00000621854 213 ntBASIC1.53□□□□□ -2.16
AP3B1O00203 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
AP3B1O00203 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
AP3B1O00203 RNU6-179P-201ENST00000363350 107 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms