Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORD73A-201ENST00000386062 65 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 MIR1261-201ENST00000408659 82 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 RNU2-63P-201ENST00000410792 194 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AC007064.1-201ENST00000412238 351 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AC243964.1-201ENST00000441814 261 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 USP9YP8-201ENST00000441913 500 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 Y_RNA.654-201ENST00000497848 106 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AF213884.2-201ENST00000510417 903 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 RNU6-323P-201ENST00000521915 107 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AL133241.1-201ENST00000556832 487 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 MYL12BP1-201ENST00000569826 507 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 MIR3124-201ENST00000582636 67 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AL713866.2-201ENST00000603579 219 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AL355297.2-201ENST00000604792 129 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 RNU6-89P-201ENST00000606519 100 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AL357078.3-201ENST00000607528 618 ntBASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 FER-210ENST00000628534 558 ntTSL 5 BASIC2.24□□□□□ -2.05
NPIPA3F8WFD2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 Y_RNA.9-201ENST00000362354 101 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 RNU6-655P-201ENST00000362858 107 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 U8.2-201ENST00000363156 134 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 Y_RNA.402-201ENST00000383972 102 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AL162578.1-201ENST00000406202 378 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AL117339.3-201ENST00000418733 162 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 RNU7-138P-201ENST00000459479 64 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 RNU6-1208P-201ENST00000459588 107 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 ZNF519P2-201ENST00000557032 169 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC093249.1-201ENST00000567049 203 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AC002543.1-201ENST00000299783 1954 ntBASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
NPIPA3F8WFD2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 Y_RNA.373-201ENST00000365600 103 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 RNU6-692P-201ENST00000384496 107 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 MIR514A2-201ENST00000385131 88 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 MIR514A3-201ENST00000385132 88 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 ARL5AP1-201ENST00000418991 388 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 ERLEC1P1-201ENST00000433806 578 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 MTND1P34-201ENST00000438556 671 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 RPS12P2-201ENST00000439728 269 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AL161788.1-201ENST00000441805 169 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC124916.1-201ENST00000444020 547 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 CYP2C59P-201ENST00000457790 269 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AL121594.1-201ENST00000475906 575 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC083904.1-201ENST00000487828 231 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 RPL38P4-201ENST00000502376 214 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC008549.1-201ENST00000512900 643 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 COPS8P3-201ENST00000526024 482 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC109635.3-201ENST00000529536 185 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC078814.3-201ENST00000553036 491 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC060766.3-201ENST00000591442 263 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC068790.6-201ENST00000602558 258 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AC241585.2-209ENST00000638217 143 ntBASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.22□□□□□ -2.05
NPIPA3F8WFD2 ZNF271P-202ENST00000465539 1970 ntBASIC2.21□□□□□ -2.05
NPIPA3F8WFD2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms