Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC097372.4-201ENST00000625025 466 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC092125.1-201ENST00000562568 1995 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RNU6-929P-201ENST00000384429 107 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 SNORA75.3-201ENST00000391231 150 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 NCOR1P3-201ENST00000420479 303 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 HLA-S-202ENST00000425174 53 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RAB11AP1-201ENST00000442978 646 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AC084024.2-201ENST00000503480 791 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 MTCYBP27-201ENST00000555160 670 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 MIR7844-201ENST00000616161 122 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RNU6-226P-201ENST00000363778 107 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AC105758.1-201ENST00000506038 399 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RNA5SP168-201ENST00000516642 112 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RN7SKP88-201ENST00000516847 250 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AP002004.2-201ENST00000531656 154 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 7SK.8-201ENST00000612110 250 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 7SK.11-201ENST00000615477 250 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AC009233.1-201ENST00000616477 371 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RMST_7.1-201ENST00000621935 268 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 7SK.13-201ENST00000622040 250 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.2□□□□□ -2.44
COL6A5A8TX70 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.2□□□□□ -2.44
COL6A5A8TX70 RNU6-877P-201ENST00000383868 107 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AL590632.1-201ENST00000424289 371 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AC243964.1-201ENST00000441814 261 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AC091885.1-201ENST00000506658 268 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AP003392.2-201ENST00000527269 208 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 NAMPTP3-201ENST00000569273 224 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 MIR4765-201ENST00000585007 77 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 MIR6828-201ENST00000636181 60 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 SNORD114-11-201ENST00000363738 75 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 MIR218-1-201ENST00000384999 110 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 MIR561-201ENST00000385216 97 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 SNORD4A-201ENST00000459174 72 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 RPS29P27-201ENST00000463711 170 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AC018868.1-201ENST00000491307 315 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AC104408.1-201ENST00000605241 170 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 AL078595.3-201ENST00000623815 1166 ntBASIC-0.21□□□□□ -2.44
COL6A5A8TX70 SNORA42.1-201ENST00000363515 137 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 RNU4-16P-201ENST00000364737 141 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL6A5A8TX70 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
COL6A5A8TX70 DSTNP4-201ENST00000399472 474 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 MIR548L-201ENST00000408303 86 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 C1DP1-201ENST00000426049 402 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A5A8TX70 NANOGP2-201ENST00000435391 727 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 BRK1P2-201ENST00000442875 223 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AC016065.2-201ENST00000514530 444 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AC105029.1-201ENST00000520250 669 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AC027288.2-201ENST00000553028 243 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AC022432.1-201ENST00000595739 310 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A5A8TX70 AC019226.1-201ENST00000625666 515 ntBASIC-0.22□□□□□ -2.44
COL6A5A8TX70 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
COL6A5A8TX70 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.22□□□□□ -2.45
COL6A5A8TX70 SNORD99-201ENST00000408612 74 ntBASIC-0.22□□□□□ -2.45
COL6A5A8TX70 RNU2-7P-201ENST00000410794 178 ntBASIC-0.22□□□□□ -2.45
COL6A5A8TX70 RNA5SP501-201ENST00000410990 112 ntBASIC-0.22□□□□□ -2.45
COL6A5A8TX70 AL009028.1-201ENST00000604895 802 ntBASIC-0.22□□□□□ -2.45
COL6A5A8TX70 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.22□□□□□ -2.45
COL6A5A8TX70 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 SNORD83B-201ENST00000386745 93 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 MIR942-201ENST00000401111 86 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 DHFRP6-201ENST00000401776 268 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC245102.2-201ENST00000448956 180 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 ZNF886P-201ENST00000450781 723 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL512310.8-201ENST00000550183 120 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL121579.1-201ENST00000555129 305 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC112220.3-201ENST00000605502 502 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 MIR196A1-201ENST00000388006 70 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 MLLT10P1-201ENST00000418346 262 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms