Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 RNU6-858P-201ENST00000362436 107 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 SET-203ENST00000372688 801 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 MIR628-201ENST00000385229 95 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 MIR670-201ENST00000390142 98 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 SNORA12.2-201ENST00000391040 156 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC074117.2-201ENST00000417130 397 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC005300.1-201ENST00000428401 373 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 MTCO3P29-201ENST00000432119 779 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AL133547.1-201ENST00000448546 220 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 MTCO3P8-201ENST00000453691 755 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 snoU13.28-201ENST00000459235 104 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 RPS26P21-201ENST00000475397 348 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 RNU6-581P-201ENST00000516214 105 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 SNORA31.26-201ENST00000517250 137 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC131281.1-201ENST00000522984 164 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC068831.7-201ENST00000616954 363 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC110774.1-201ENST00000623567 2018 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AC093831.2-201ENST00000624393 3427 ntBASIC3.69□□□□□ -1.82
CCDC66A2RUB6 AL353743.1-202ENST00000431724 1695 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC66A2RUB6 SNORD56.1-201ENST00000362913 68 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 SNORA63.7-201ENST00000365579 123 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 RNU6-1109P-201ENST00000391187 107 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 MIR190B-201ENST00000401119 79 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.592-201ENST00000410274 109 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 MTCO3P19-201ENST00000415864 321 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC66A2RUB6 CYCSP32-201ENST00000440548 321 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 RPS3AP12-201ENST00000443616 753 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 MED28P2-201ENST00000475771 317 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC66A2RUB6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC66A2RUB6 RN7SKP282-201ENST00000516824 299 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC006199.1-201ENST00000548728 219 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 HMGN2P15-201ENST00000585707 270 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC006006.1-201ENST00000603082 144 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC019159.1-201ENST00000605094 187 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC100812.1-201ENST00000607622 580 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC007792.1-201ENST00000623023 402 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC073476.4-201ENST00000628409 72 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AC233981.2-201ENST00000611524 1614 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 AL161912.2-201ENST00000565707 3007 ntBASIC3.68□□□□□ -1.82
CCDC66A2RUB6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RNU6-874P-201ENST00000362390 105 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RNU6-238P-201ENST00000363313 106 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.193-201ENST00000363979 102 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RNU4-9P-201ENST00000364951 139 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.405-201ENST00000383979 100 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RNU6-26P-201ENST00000383985 107 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.451-201ENST00000384200 100 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.524-201ENST00000384564 100 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.561-201ENST00000384694 100 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RNA5SP44-201ENST00000410446 133 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC007969.2-201ENST00000441891 191 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AL731563.1-201ENST00000442202 214 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AL031659.1-201ENST00000447075 539 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RPL23AP67-201ENST00000465341 474 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC034236.1-201ENST00000469891 373 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC097462.2-201ENST00000504623 481 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RNU7-175P-201ENST00000515915 61 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AL356157.2-201ENST00000605122 111 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AL138880.2-201ENST00000616214 239 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 AC039056.2-201ENST00000622261 511 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 MIR3199-2-201ENST00000636243 86 ntBASIC3.67□□□□□ -1.82
CCDC66A2RUB6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC66A2RUB6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.210-201ENST00000364161 110 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 RNU4-50P-201ENST00000364361 141 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 RNU6-702P-201ENST00000364982 107 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms